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EIF2S3
BASAL GANGLIA - Expression summary
Protein expression
Caudatei
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:33.5 nTPM
HPA:33.5 nTPM
GTEx:29.9 nTPM
FANTOM5:56.3 Scaled Tags Per Million

CAUDATE - Antibody stainingi
Antibody CAB012471
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 33.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 33.5
2481 Female, age 94, left hemisphere 37.8
2846 Female, age 79, unknown 36.7
1854 Male, age 80, left hemisphere 33.9
1857 Female, age 85, left hemisphere 33.0
2290 Female, age 72, unknown 32.8
1781 Male, age 74, unknown 32.4
2288 Male, age 75, left hemisphere 32.2
2289 Male, age 61, right hemisphere 29.6
Claustrum
nTPM: 30.3
2198 Male, age 80, both hemispheres 33.2
2392 Female, age 94, both hemispheres 31.8
1956 Male, age 74, unknown 31.3
2196 Female, age 79, unknown 31.1
2292 Female, age 85, both hemispheres 30.9
2284 Female, age 91, both hemispheres 29.9
2491 Male, age 75, both hemispheres 28.9
2645 Female, age 72, unknown 28.0
2568 Male, age 61, both hemispheres 27.7
Globus pallidus, externus
nTPM: 31.7
2395 Male, age 75, both hemispheres 39.4
1996 Male, age 80, right hemisphere 33.1
2772 Female, age 79, unknown 32.7
2567 Female, age 72, unknown 28.1
2646 Male, age 61, right hemisphere 25.1
Globus pallidus, internus
nTPM: 32.7
2287 Male, age 75, right hemisphere 36.1
2483 Female, age 94, right hemisphere 35.3
2778 Female, age 91, both hemispheres 34.1
2037 Male, age 80, right hemisphere 32.1
1818 Male, age 74, unknown 31.2
2111 Female, age 85, right hemisphere 30.4
2566 Female, age 72, unknown 29.5
Nucleus accumbens
nTPM: 32.4
2391 Female, age 94, left hemisphere 37.2
1856 Female, age 91, right hemisphere 33.2
1783 Male, age 74, unknown 33.0
2286 Male, age 75, left hemisphere 32.3
1806 Female, age 85, left hemisphere 32.2
2698 Female, age 72, unknown 32.1
2732 Male, age 80, right hemisphere 30.1
2824 Male, age 61, right hemisphere 29.3
Nucleus basalis of Meynert
nTPM: 31.9
2393 Male, age 80, right hemisphere 35.4
2484 Female, age 94, left hemisphere 34.4
2821 Male, age 75, both hemispheres 33.1
2569 Male, age 61, both hemispheres 24.8
Nucleus of the diagonal band
nTPM: 30.5
2775 Male, age 80, right hemisphere 32.6
1812 Female, age 91, both hemispheres 32.5
2029 Male, age 61, right hemisphere 30.1
2195 Female, age 85, both hemispheres 30.1
1979 Male, age 74, unknown 27.3
Olfactory tubercle
nTPM: 29.7
1846 Male, age 80, right hemisphere 32.3
1998 Female, age 91, both hemispheres 31.0
2487 Female, age 94, left hemisphere 27.9
2856 Male, age 75, right hemisphere 27.8
Putamen
nTPM: 33.3
2466 Female, age 79, unknown 37.4
2482 Female, age 94, left hemisphere 36.4
1829 Male, age 74, unknown 34.9
1838 Male, age 80, right hemisphere 34.6
1937 Female, age 91, right hemisphere 32.8
2489 Female, age 72, unknown 28.8
2647 Male, age 75, left hemisphere 28.2
Septal nuclei
nTPM: 29.8
2031 Female, age 72, unknown 33.5
1960 Male, age 74, unknown 30.8
2009 Female, age 91, both hemispheres 30.7
2629 Female, age 94, right hemisphere 30.0
2199 Male, age 80, right hemisphere 28.6
2394 Male, age 61, left hemisphere 28.2
2059 Female, age 85, both hemispheres 27.1

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 29.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 29.9
Samples: 246

Max nTPM: 45.7
Min nTPM: 22.8
Std nTPM: 4.5
Median nTPM: 28.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 45.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 44.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 43.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 42.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 41.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 41.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 40.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 40.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 40.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 39.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 39.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 27.7
Samples: 246

Max nTPM: 45.3
Min nTPM: 17.8
Std nTPM: 4.8
Median nTPM: 26.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 45.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 43.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 42.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 41.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 41.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 41.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 40.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 40.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 39.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 38.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 38.7
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Brain - Putamen (basal ganglia)
Average nTPM: 28.4
Samples: 205

Max nTPM: 43.6
Min nTPM: 19.1
Std nTPM: 4.1
Median nTPM: 27.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 43.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 41.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 39.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 39.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 39.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 38.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 38.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 38.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 35.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 35.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 35.4
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 48.8
FF:10164-103B2 76 years, female 48.8
Globus pallidus
Scaled Tags Per Million: 36.5
FF:10161-103A8 76 years, female 56.5
FF:10175-103C4 60 years, female 16.5
Nucleus accumbens
Scaled Tags Per Million: 35.8
FF:10037-101F1 23-56 years, mixed 35.8
Putamen
Scaled Tags Per Million: 56.3
FF:10176-103C5 60 years, female 56.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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