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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:27.2 nTPM
HPA:27.2 nTPM
GTEx:13.0 nTPM
FANTOM5:41.3 Scaled Tags Per Million
Pig:4.5 nTPM
Mouse:13.6 nTPM
Allen mouse:11.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042001
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.2
Sample id Sample description nTPM
Hippocampus
nTPM: 26.1
1898 Male, age 80, left hemisphere 28.2
2148 Female, age 91, left hemisphere 26.3
1911 Female, age 85, right hemisphere 25.9
2621 Female, age 67, right hemisphere 25.8
2529 Female, age 94, left hemisphere 25.4
1855 Male, age 76, left hemisphere 25.1
Dentate gyrus
nTPM: 26.4
1927 Female, age 91, both hemispheres 27.2
2530 Female, age 94, left hemisphere 27.1
2528 Male, age 74, both hemispheres 26.8
2531 Female, age 67, both hemispheres 26.2
2246 Female, age 85, both hemispheres 25.9
2010 Male, age 76, both hemispheres 25.4
Entorhinal gyrus
nTPM: 27.1
2613 Female, age 94, left hemisphere 28.1
1787 Male, age 76, left hemisphere 27.6
2764 Male, age 80, right hemisphere 27.2
1938 Female, age 85, left hemisphere 27.1
2117 Female, age 91, right hemisphere 27.1
2686 Male, age 75, right hemisphere 25.5
Hippocampus, CA1
nTPM: 26.7
2749 Male, age 80, left hemisphere 28.1
2527 Male, age 74, both hemispheres 26.7
2082 Female, age 91, right hemisphere 26.5
2045 Male, age 76, both hemispheres 26.2
1873 Female, age 85, both hemispheres 25.9
Hippocampus, CA2
nTPM: 26.9
1963 Male, age 80, left hemisphere 28.1
1892 Male, age 76, both hemispheres 27.2
1940 Female, age 85, left hemisphere 27.1
2437 Female, age 94, left hemisphere 27.1
2249 Male, age 74, both hemispheres 26.5
2113 Female, age 91, right hemisphere 25.4
Hippocampus, CA3
nTPM: 26.8
2620 Female, age 94, left hemisphere 27.7
2861 Female, age 67, both hemispheres 27.5
2137 Male, age 80, left hemisphere 26.8
1867 Male, age 76, both hemispheres 26.5
2436 Male, age 74, both hemispheres 26.4
1891 Female, age 85, both hemispheres 25.8
Parahippocampal cortex
nTPM: 26.2
1933 Female, age 85, both hemispheres 27.1
1990 Female, age 91, right hemisphere 27.0
2245 Female, age 91, both hemispheres 27.0
1850 Male, age 80, both hemispheres 26.4
2250 Female, age 67, right hemisphere 26.2
2018 Male, age 76, both hemispheres 25.9
2532 Female, age 72, left hemisphere 25.8
2693 Female, age 94, both hemispheres 25.8
2692 Male, age 74, both hemispheres 25.6
2622 Female, age 67, right hemisphere 25.1
Perirhinal gyrus
nTPM: 27.2
1794 Male, age 80, right hemisphere 28.5
2848 Male, age 76, right hemisphere 27.3
1847 Female, age 91, left hemisphere 27.2
1841 Female, age 85, right hemisphere 27.0
2521 Female, age 94, right hemisphere 25.9
Subiculum
nTPM: 26.3
2438 Female, age 94, left hemisphere 27.0
1977 Female, age 85, both hemispheres 26.6
2729 Female, age 91, right hemisphere 26.3
2619 Male, age 74, both hemispheres 26.2
1901 Male, age 80, both hemispheres 25.9
2042 Male, age 76, both hemispheres 25.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.0
Samples: 197

Max nTPM: 33.8
Min nTPM: 6.3
Std nTPM: 3.8
Median nTPM: 12.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 33.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 26.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 21.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 20.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 20.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 20.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 20.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 20.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 19.9
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 19.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 19.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.3
FF:10153-102I9 76 years, female 43.9
FF:10169-103B7 60 years, female 38.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.3
Samples: 4

Max nTPM: 5.0
Min nTPM: 3.6
Sample A Female 5.0
Sample B Female 4.2
Sample C Male 4.4
Sample D Male 3.6
Entorhinal cortex
nTPM: 4.3
Samples: 4

Max nTPM: 4.6
Min nTPM: 4.1
Sample A Female 4.6
Sample B Female 4.4
Sample C Male 4.1
Sample D Male 4.2
Subiculum
nTPM: 4.4
Samples: 4

Max nTPM: 5.3
Min nTPM: 3.9
Sample A Female 5.3
Sample B Female 3.9
Sample C Male 4.4
Sample D Male 3.9
Ventral hippocampus
nTPM: 4.5
Samples: 4

Max nTPM: 5.7
Min nTPM: 3.8
Sample A Female 4.5
Sample B Female 3.8
Sample C Male 5.7
Sample D Male 4.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.6
Samples: 4

Max nTPM: 14.9
Min nTPM: 12.4
Sample A Male 14.3
Sample B Male 14.9
Sample C Female 12.9
Sample D Female 12.4
Hippocampal formation
nTPM: 11.8
Samples: 4

Max nTPM: 12.7
Min nTPM: 10.7
Sample A Male 12.7
Sample B Male 11.6
Sample C Female 10.7
Sample D Female 12.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.7
68920737 Antisense, RP_050303_01_B04, Mouse strain C57BL/6J (56 days, male) 11.7

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The Human Protein Atlas

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