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HABP4
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:62.3 nTPM
HPA:62.3 nTPM
GTEx:80.4 nTPM
FANTOM5:64.3 Scaled Tags Per Million
Pig:50.0 nTPM
Mouse:132.1 nTPM
Allen mouse:15.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055969Antibody HPA062366
Glial cells Not detectedLow
Neuronal cells LowMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 62.3
Sample id Sample description nTPM
Hippocampus
nTPM: 58.6
1898 Male, age 80, left hemisphere 62.6
2621 Female, age 67, right hemisphere 62.0
2529 Female, age 94, left hemisphere 61.9
2148 Female, age 91, left hemisphere 57.6
1855 Male, age 76, left hemisphere 55.7
1911 Female, age 85, right hemisphere 51.6
Dentate gyrus
nTPM: 58.0
2530 Female, age 94, left hemisphere 71.5
1927 Female, age 91, both hemispheres 58.4
2010 Male, age 76, both hemispheres 56.6
2531 Female, age 67, both hemispheres 55.8
2246 Female, age 85, both hemispheres 53.1
2528 Male, age 74, both hemispheres 52.4
Entorhinal gyrus
nTPM: 62.1
2613 Female, age 94, left hemisphere 69.0
2764 Male, age 80, right hemisphere 67.7
2686 Male, age 75, right hemisphere 63.1
1938 Female, age 85, left hemisphere 60.2
1787 Male, age 76, left hemisphere 57.4
2117 Female, age 91, right hemisphere 54.9
Hippocampus, CA1
nTPM: 58.1
2749 Male, age 80, left hemisphere 73.3
1873 Female, age 85, both hemispheres 60.6
2527 Male, age 74, both hemispheres 58.8
2045 Male, age 76, both hemispheres 50.0
2082 Female, age 91, right hemisphere 47.8
Hippocampus, CA2
nTPM: 58.8
1963 Male, age 80, left hemisphere 68.2
1892 Male, age 76, both hemispheres 61.6
2437 Female, age 94, left hemisphere 58.4
1940 Female, age 85, left hemisphere 56.8
2249 Male, age 74, both hemispheres 55.8
2113 Female, age 91, right hemisphere 51.9
Hippocampus, CA3
nTPM: 55.1
2137 Male, age 80, left hemisphere 63.1
2861 Female, age 67, both hemispheres 58.4
1867 Male, age 76, both hemispheres 54.4
2620 Female, age 94, left hemisphere 53.3
1891 Female, age 85, both hemispheres 52.3
2436 Male, age 74, both hemispheres 49.3
Parahippocampal cortex
nTPM: 60.1
2245 Female, age 91, both hemispheres 67.2
1850 Male, age 80, both hemispheres 65.5
2532 Female, age 72, left hemisphere 62.7
1990 Female, age 91, right hemisphere 62.3
2622 Female, age 67, right hemisphere 61.9
2692 Male, age 74, both hemispheres 58.7
1933 Female, age 85, both hemispheres 58.4
2250 Female, age 67, right hemisphere 56.5
2018 Male, age 76, both hemispheres 54.5
2693 Female, age 94, both hemispheres 53.6
Perirhinal gyrus
nTPM: 62.3
1847 Female, age 91, left hemisphere 65.3
1794 Male, age 80, right hemisphere 64.7
1841 Female, age 85, right hemisphere 62.3
2521 Female, age 94, right hemisphere 59.9
2848 Male, age 76, right hemisphere 59.1
Subiculum
nTPM: 55.6
1901 Male, age 80, both hemispheres 58.9
2438 Female, age 94, left hemisphere 58.2
1977 Female, age 85, both hemispheres 57.9
2619 Male, age 74, both hemispheres 56.7
2042 Male, age 76, both hemispheres 52.3
2729 Female, age 91, right hemisphere 49.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 80.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 80.4
Samples: 197

Max nTPM: 177.9
Min nTPM: 30.8
Std nTPM: 23.2
Median nTPM: 78.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 177.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 170.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 150.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 134.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 130.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 129.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 126.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 124.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 121.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 120.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 119.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.3
FF:10153-102I9 76 years, female 65.8
FF:10169-103B7 60 years, female 62.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 50.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 50.0
Samples: 4

Max nTPM: 70.6
Min nTPM: 35.9
Sample A Female 70.6
Sample B Female 51.4
Sample C Male 41.9
Sample D Male 35.9
Entorhinal cortex
nTPM: 49.2
Samples: 4

Max nTPM: 59.0
Min nTPM: 41.7
Sample A Female 49.0
Sample B Female 59.0
Sample C Male 47.2
Sample D Male 41.7
Subiculum
nTPM: 37.4
Samples: 4

Max nTPM: 50.2
Min nTPM: 32.4
Sample A Female 50.2
Sample B Female 32.4
Sample C Male 32.4
Sample D Male 34.6
Ventral hippocampus
nTPM: 46.0
Samples: 4

Max nTPM: 56.4
Min nTPM: 28.8
Sample A Female 56.4
Sample B Female 28.8
Sample C Male 50.2
Sample D Male 48.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 132.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 132.2
Samples: 4

Max nTPM: 140.0
Min nTPM: 124.4
Sample A Male 131.2
Sample B Male 133.1
Sample C Female 124.4
Sample D Female 140.0
Hippocampal formation
nTPM: 111.8
Samples: 4

Max nTPM: 119.5
Min nTPM: 105.7
Sample A Male 119.5
Sample B Male 105.8
Sample C Female 116.3
Sample D Female 105.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.7
69734893 Antisense, RP_050503_01_E12, Mouse strain C57BL/6J (56 days, male) 15.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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