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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:106.2 nTPM
HPA:106.2 nTPM
GTEx:93.6 nTPM
FANTOM5:200.0 Scaled Tags Per Million
Pig:84.6 nTPM
Mouse:185.2 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000289Antibody CAB019435Antibody CAB073410
Glial cells MediumMediumNot detected
Neuronal cells Not detectedLowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 106.2
Sample id Sample description nTPM
Hippocampus
nTPM: 98.5
1898 Male, age 80, left hemisphere 104.8
1855 Male, age 76, left hemisphere 102.9
2529 Female, age 94, left hemisphere 100.5
2621 Female, age 67, right hemisphere 99.3
2148 Female, age 91, left hemisphere 95.1
1911 Female, age 85, right hemisphere 88.6
Dentate gyrus
nTPM: 102.7
2010 Male, age 76, both hemispheres 112.4
2528 Male, age 74, both hemispheres 104.0
2530 Female, age 94, left hemisphere 102.9
2531 Female, age 67, both hemispheres 100.6
2246 Female, age 85, both hemispheres 98.3
1927 Female, age 91, both hemispheres 97.9
Entorhinal gyrus
nTPM: 99.0
2764 Male, age 80, right hemisphere 110.7
2613 Female, age 94, left hemisphere 101.0
2117 Female, age 91, right hemisphere 97.9
1938 Female, age 85, left hemisphere 95.9
1787 Male, age 76, left hemisphere 94.5
2686 Male, age 75, right hemisphere 94.2
Hippocampus, CA1
nTPM: 104.7
2749 Male, age 80, left hemisphere 114.4
2045 Male, age 76, both hemispheres 109.4
2082 Female, age 91, right hemisphere 100.7
1873 Female, age 85, both hemispheres 100.4
2527 Male, age 74, both hemispheres 98.3
Hippocampus, CA2
nTPM: 100.2
1963 Male, age 80, left hemisphere 107.5
2249 Male, age 74, both hemispheres 101.2
1892 Male, age 76, both hemispheres 101.0
2437 Female, age 94, left hemisphere 99.1
1940 Female, age 85, left hemisphere 97.6
2113 Female, age 91, right hemisphere 94.8
Hippocampus, CA3
nTPM: 102.3
2436 Male, age 74, both hemispheres 116.9
2620 Female, age 94, left hemisphere 111.5
2137 Male, age 80, left hemisphere 98.1
1867 Male, age 76, both hemispheres 97.6
2861 Female, age 67, both hemispheres 97.4
1891 Female, age 85, both hemispheres 92.3
Parahippocampal cortex
nTPM: 100.1
1850 Male, age 80, both hemispheres 106.5
2693 Female, age 94, both hemispheres 103.0
2532 Female, age 72, left hemisphere 102.8
2018 Male, age 76, both hemispheres 102.3
1933 Female, age 85, both hemispheres 100.9
2622 Female, age 67, right hemisphere 98.1
1990 Female, age 91, right hemisphere 97.9
2692 Male, age 74, both hemispheres 97.1
2245 Female, age 91, both hemispheres 96.6
2250 Female, age 67, right hemisphere 96.0
Perirhinal gyrus
nTPM: 106.2
1794 Male, age 80, right hemisphere 116.8
2521 Female, age 94, right hemisphere 107.1
1841 Female, age 85, right hemisphere 102.9
1847 Female, age 91, left hemisphere 102.1
2848 Male, age 76, right hemisphere 102.0
Subiculum
nTPM: 97.4
2619 Male, age 74, both hemispheres 100.1
1977 Female, age 85, both hemispheres 99.1
2438 Female, age 94, left hemisphere 98.3
2042 Male, age 76, both hemispheres 97.6
2729 Female, age 91, right hemisphere 95.1
1901 Male, age 80, both hemispheres 94.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 93.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 93.6
Samples: 197

Max nTPM: 132.6
Min nTPM: 51.7
Std nTPM: 14.4
Median nTPM: 92.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 132.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 129.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 129.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 129.4
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 123.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 122.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 121.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 121.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 120.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 119.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 118.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 200.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 200.0
FF:10153-102I9 76 years, female 213.9
FF:10169-103B7 60 years, female 186.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 84.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 82.1
Samples: 4

Max nTPM: 101.5
Min nTPM: 60.3
Sample A Female 101.5
Sample B Female 84.8
Sample C Male 81.6
Sample D Male 60.3
Entorhinal cortex
nTPM: 76.2
Samples: 4

Max nTPM: 84.9
Min nTPM: 66.5
Sample A Female 84.9
Sample B Female 75.4
Sample C Male 77.8
Sample D Male 66.5
Subiculum
nTPM: 79.9
Samples: 4

Max nTPM: 96.7
Min nTPM: 71.7
Sample A Female 96.7
Sample B Female 72.5
Sample C Male 78.7
Sample D Male 71.7
Ventral hippocampus
nTPM: 84.6
Samples: 4

Max nTPM: 111.5
Min nTPM: 56.0
Sample A Female 85.4
Sample B Female 56.0
Sample C Male 111.5
Sample D Male 85.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 185.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 168.4
Samples: 4

Max nTPM: 189.4
Min nTPM: 156.6
Sample A Male 156.6
Sample B Male 159.5
Sample C Female 168.2
Sample D Female 189.4
Hippocampal formation
nTPM: 185.2
Samples: 4

Max nTPM: 189.2
Min nTPM: 179.8
Sample A Male 179.8
Sample B Male 186.0
Sample C Female 189.2
Sample D Female 185.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
70194486 Antisense, RP_050517_01_E04, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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