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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:92.4 nTPM
HPA:92.4 nTPM
GTEx:44.0 nTPM
FANTOM5:138.5 Scaled Tags Per Million
Mouse:45.1 nTPM
Allen mouse:12.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019113
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 92.4
Sample id Sample description nTPM
Hippocampus
nTPM: 63.5
1911 Female, age 85, right hemisphere 82.1
2148 Female, age 91, left hemisphere 74.8
2621 Female, age 67, right hemisphere 59.2
1855 Male, age 76, left hemisphere 58.3
2529 Female, age 94, left hemisphere 56.4
1898 Male, age 80, left hemisphere 50.0
Dentate gyrus
nTPM: 64.7
1927 Female, age 91, both hemispheres 93.0
2531 Female, age 67, both hemispheres 82.1
2246 Female, age 85, both hemispheres 61.9
2528 Male, age 74, both hemispheres 59.3
2010 Male, age 76, both hemispheres 48.7
2530 Female, age 94, left hemisphere 43.0
Entorhinal gyrus
nTPM: 47.6
1787 Male, age 76, left hemisphere 54.7
2686 Male, age 75, right hemisphere 51.1
1938 Female, age 85, left hemisphere 50.4
2764 Male, age 80, right hemisphere 47.7
2613 Female, age 94, left hemisphere 45.7
2117 Female, age 91, right hemisphere 36.2
Hippocampus, CA1
nTPM: 82.5
2749 Male, age 80, left hemisphere 135.7
2045 Male, age 76, both hemispheres 93.6
2527 Male, age 74, both hemispheres 63.7
1873 Female, age 85, both hemispheres 61.5
2082 Female, age 91, right hemisphere 57.8
Hippocampus, CA2
nTPM: 57.0
1892 Male, age 76, both hemispheres 70.4
2249 Male, age 74, both hemispheres 65.4
2113 Female, age 91, right hemisphere 53.0
2437 Female, age 94, left hemisphere 52.3
1940 Female, age 85, left hemisphere 51.4
1963 Male, age 80, left hemisphere 49.5
Hippocampus, CA3
nTPM: 92.4
2137 Male, age 80, left hemisphere 159.2
2620 Female, age 94, left hemisphere 102.1
2436 Male, age 74, both hemispheres 89.5
2861 Female, age 67, both hemispheres 79.3
1867 Male, age 76, both hemispheres 71.1
1891 Female, age 85, both hemispheres 52.9
Parahippocampal cortex
nTPM: 52.5
2250 Female, age 67, right hemisphere 60.6
2622 Female, age 67, right hemisphere 59.3
2245 Female, age 91, both hemispheres 58.5
2693 Female, age 94, both hemispheres 53.6
1850 Male, age 80, both hemispheres 52.9
2692 Male, age 74, both hemispheres 49.3
2532 Female, age 72, left hemisphere 48.9
1990 Female, age 91, right hemisphere 47.5
2018 Male, age 76, both hemispheres 47.1
1933 Female, age 85, both hemispheres 46.9
Perirhinal gyrus
nTPM: 58.5
1794 Male, age 80, right hemisphere 62.4
1841 Female, age 85, right hemisphere 61.1
1847 Female, age 91, left hemisphere 56.6
2521 Female, age 94, right hemisphere 56.4
2848 Male, age 76, right hemisphere 56.1
Subiculum
nTPM: 55.7
1901 Male, age 80, both hemispheres 71.9
2042 Male, age 76, both hemispheres 63.5
2729 Female, age 91, right hemisphere 57.7
2619 Male, age 74, both hemispheres 48.8
1977 Female, age 85, both hemispheres 46.7
2438 Female, age 94, left hemisphere 45.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.0
Samples: 197

Max nTPM: 107.2
Min nTPM: 9.4
Std nTPM: 17.0
Median nTPM: 40.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 107.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 101.3
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 96.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 95.3
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 93.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 89.3
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 86.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 84.0
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 76.0
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 75.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 75.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 138.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 138.5
FF:10169-103B7 60 years, female 175.7
FF:10153-102I9 76 years, female 101.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.1
Samples: 4

Max nTPM: 56.2
Min nTPM: 30.9
Sample A Male 46.0
Sample B Male 47.2
Sample C Female 30.9
Sample D Female 56.2
Hippocampal formation
nTPM: 24.6
Samples: 4

Max nTPM: 34.7
Min nTPM: 16.8
Sample A Male 19.6
Sample B Male 34.7
Sample C Female 27.3
Sample D Female 16.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.4
74640879 Antisense, RP_051121_03_E04, Mouse strain C57BL/6J (56 days, male) 16.4
73573211 Antisense, RP_051121_03_E04, Mouse strain C57BL/6J (56 days, male) 15.5
70608490 Antisense, RP_050630_01_D05, Mouse strain C57BL/6J (56 days, male) 14.8
71210400 Antisense, RP_050810_04_B04, Mouse strain C57BL/6J (56 days, male) 13.0
74509476 Antisense, RP_060207_02_F06, Mouse strain C57BL/6J (56 days, male) 5.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.