ABOUTMENU
HELP
NEWS
RBM39
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:16.5 nTPM
HPA:16.5 nTPM
GTEx:40.1 nTPM
FANTOM5:318.5 Scaled Tags Per Million
Pig:112.3 nTPM
Mouse:88.6 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001591
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.5
Sample id Sample description nTPM
Hippocampus
nTPM: 16.5
2621 Female, age 67, right hemisphere 21.1
2529 Female, age 94, left hemisphere 19.1
1898 Male, age 80, left hemisphere 18.3
1855 Male, age 76, left hemisphere 16.3
1911 Female, age 85, right hemisphere 12.9
2148 Female, age 91, left hemisphere 11.2
Dentate gyrus
nTPM: 13.8
2531 Female, age 67, both hemispheres 27.5
2246 Female, age 85, both hemispheres 20.0
2530 Female, age 94, left hemisphere 14.3
2010 Male, age 76, both hemispheres 13.9
1927 Female, age 91, both hemispheres 6.7
2528 Male, age 74, both hemispheres 0.2
Entorhinal gyrus
nTPM: 14.1
2686 Male, age 75, right hemisphere 21.5
1787 Male, age 76, left hemisphere 14.7
1938 Female, age 85, left hemisphere 13.9
2117 Female, age 91, right hemisphere 13.7
2764 Male, age 80, right hemisphere 12.3
2613 Female, age 94, left hemisphere 8.7
Hippocampus, CA1
nTPM: 12.2
2527 Male, age 74, both hemispheres 14.8
2749 Male, age 80, left hemisphere 14.6
1873 Female, age 85, both hemispheres 12.3
2045 Male, age 76, both hemispheres 11.7
2082 Female, age 91, right hemisphere 7.6
Hippocampus, CA2
nTPM: 10.6
1940 Female, age 85, left hemisphere 15.6
2437 Female, age 94, left hemisphere 13.9
1892 Male, age 76, both hemispheres 13.6
2113 Female, age 91, right hemisphere 8.4
1963 Male, age 80, left hemisphere 6.3
2249 Male, age 74, both hemispheres 6.0
Hippocampus, CA3
nTPM: 13.8
2861 Female, age 67, both hemispheres 28.7
2137 Male, age 80, left hemisphere 13.7
1867 Male, age 76, both hemispheres 11.7
2620 Female, age 94, left hemisphere 10.7
1891 Female, age 85, both hemispheres 10.0
2436 Male, age 74, both hemispheres 8.3
Parahippocampal cortex
nTPM: 16.2
2622 Female, age 67, right hemisphere 29.2
2245 Female, age 91, both hemispheres 28.8
2532 Female, age 72, left hemisphere 20.6
2692 Male, age 74, both hemispheres 20.5
1850 Male, age 80, both hemispheres 12.6
2250 Female, age 67, right hemisphere 11.3
2018 Male, age 76, both hemispheres 10.7
1933 Female, age 85, both hemispheres 9.9
1990 Female, age 91, right hemisphere 9.5
2693 Female, age 94, both hemispheres 9.2
Perirhinal gyrus
nTPM: 12.7
2848 Male, age 76, right hemisphere 16.7
2521 Female, age 94, right hemisphere 15.0
1794 Male, age 80, right hemisphere 13.5
1841 Female, age 85, right hemisphere 11.7
1847 Female, age 91, left hemisphere 6.5
Subiculum
nTPM: 15.2
2438 Female, age 94, left hemisphere 21.4
1901 Male, age 80, both hemispheres 17.6
1977 Female, age 85, both hemispheres 17.2
2042 Male, age 76, both hemispheres 15.7
2619 Male, age 74, both hemispheres 12.4
2729 Female, age 91, right hemisphere 7.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.1
Samples: 197

Max nTPM: 75.1
Min nTPM: 20.6
Std nTPM: 11.8
Median nTPM: 37.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 75.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 75.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 73.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 72.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 72.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 67.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 67.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 66.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 65.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 65.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 63.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 318.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 318.5
FF:10169-103B7 60 years, female 336.9
FF:10153-102I9 76 years, female 300.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 112.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 112.3
Samples: 4

Max nTPM: 122.3
Min nTPM: 102.7
Sample A Female 112.4
Sample B Female 102.7
Sample C Male 122.3
Sample D Male 111.9
Entorhinal cortex
nTPM: 100.3
Samples: 4

Max nTPM: 105.5
Min nTPM: 96.5
Sample A Female 96.5
Sample B Female 105.5
Sample C Male 101.3
Sample D Male 97.7
Subiculum
nTPM: 106.8
Samples: 4

Max nTPM: 110.9
Min nTPM: 101.5
Sample A Female 109.1
Sample B Female 110.9
Sample C Male 101.5
Sample D Male 105.8
Ventral hippocampus
nTPM: 105.2
Samples: 4

Max nTPM: 117.4
Min nTPM: 86.4
Sample A Female 117.4
Sample B Female 114.6
Sample C Male 86.4
Sample D Male 102.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 88.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 78.4
Samples: 4

Max nTPM: 83.6
Min nTPM: 71.7
Sample A Male 79.0
Sample B Male 83.6
Sample C Female 79.1
Sample D Female 71.7
Hippocampal formation
nTPM: 88.6
Samples: 4

Max nTPM: 98.1
Min nTPM: 78.5
Sample A Male 93.8
Sample B Male 98.1
Sample C Female 84.1
Sample D Female 78.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71325420 Antisense, RP_050825_02_H01, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.