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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		79.870
RNA expressioni
Consensus:5096.2 nTPM
HPA:5096.2 nTPM
GTEx:3462.9 nTPM
FANTOM5:3735.8 Scaled Tags Per Million
Pig:1010.2 nTPM
Mouse:141.5 nTPM
Allen mouse:1.1 Expression energy

AMYGDALA - Mouse brain profilei , antibody CAB000039
Amygdala mean intensity 79.870
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 54.556
Basal medial amygdaloid nucleus 53.897
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 44.056
Cortical amygdala 52.025
Central amygdala 58.574
Medial amygdaloid nucleus 50.398

AMYGDALA - HPA Brain RNA-seq
Max nTPM 5096.2
Sample id Sample description nTPM
Amygdala
nTPM: 5096.2
2695 Female, age 67, right hemisphere 8133.5
1987 Female, age 91, left hemisphere 5595.6
2814 Male, age 76, right hemisphere 4886.7
2517 Female, age 94, left hemisphere 3476.8
2514 Male, age 75, right hemisphere 3388.2
Basal amygdala
nTPM: 3793.1
1955 Male, age 76, both hemispheres 4579.5
2609 Male, age 75, right hemisphere 3913.5
2110 Male, age 80, left hemisphere 3874.1
2243 Female, age 91, right hemisphere 3736.9
2827 Female, age 67, right hemisphere 3450.3
2685 Female, age 94, left hemisphere 3204.4
Central amygdala
nTPM: 4589.8
2515 Male, age 75, right hemisphere 5497.9
1905 Male, age 76, both hemispheres 5086.4
2826 Female, age 94, left hemisphere 4441.8
2701 Female, age 91, right hemisphere 4105.9
2239 Male, age 80, left hemisphere 3816.8
Corticomedial amygdala
nTPM: 3758.1
2242 Female, age 91, right hemisphere 4276.1
2428 Male, age 75, right hemisphere 4127.1
2240 Male, age 76, both hemispheres 4049.1
2829 Male, age 80, left hemisphere 3930.9
2535 Female, age 67, right hemisphere 3365.3
2429 Female, age 94, left hemisphere 2800.4
Lateral amygdala
nTPM: 4205.5
1883 Male, age 76, both hemispheres 4989.9
2256 Male, age 80, left hemisphere 4840.1
2830 Female, age 67, right hemisphere 4385.8
2516 Male, age 75, right hemisphere 4097.0
2255 Female, age 91, right hemisphere 3776.2
2534 Female, age 94, left hemisphere 3144.0
Stria terminalis, bed nucleus
nTPM: 3268.2
2201 Male, age 74, unknown 4147.1
1974 Female, age 91, both hemispheres 3048.7
2486 Female, age 94, both hemispheres 2608.9

AMYGDALA - GTEx RNA-seqi
Average nTPM 3462.9
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 3462.9
Samples: 152

Max nTPM: 18620.2
Min nTPM: 70.3
Std nTPM: 2386.3
Median nTPM: 2928.6
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 18620.2
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 12433.1
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 10103.3
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 9994.1
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 8463.1
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 8459.5
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 8384.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 7509.2
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 7414.9
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 7362.6
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 6913.3
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 3735.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 3735.8
FF:10151-102I7 76 years, female 3735.8

AMYGDALA - Pig RNA-seqi
Average nTPM 1010.2
Pig sample Sample description nTPM
Amygdala
nTPM: 1010.2
Samples: 4

Max nTPM: 1169.8
Min nTPM: 789.1
Sample A Female 981.1
Sample B Female 1100.9
Sample C Male 789.1
Sample D Male 1169.8

AMYGDALA - Mouse RNA-seqi
Average nTPM 141.5
Mouse sample Sample description nTPM
Amygdala
nTPM: 141.6
Samples: 4

Max nTPM: 165.1
Min nTPM: 119.4
Sample A Male 145.4
Sample B Male 136.3
Sample C Female 119.4
Sample D Female 165.1

AMYGDALA - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 1.1
1358 Antisense, RP_Baylor_253913, Mouse strain C57BL/6J (56 days, male) 1.3
79591671 Antisense, RP_071204_04_G06, Mouse strain C57BL/6J (56 days, male) 1.0
1357 Antisense, RP_Baylor_253913, Mouse strain C57BL/6J (56 days, male) 0.9
79913385 Antisense, RP_071204_04_G06, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.