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MGAT1
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:43.2 nTPM
HPA:43.2 nTPM
GTEx:40.2 nTPM
FANTOM5:78.4 Scaled Tags Per Million
Pig:32.1 nTPM
Mouse:26.8 nTPM
Allen mouse:0.1 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 43.2
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 40.6
2666 Male, age 74, left hemisphere 48.4
2828 Female, age 72, unknown 46.0
2586 Male, age 75, left hemisphere 43.6
2019 Male, age 18, unknown 43.0
1830 Male, age 51, unknown 39.6
1833 Male, age 53, unknown 39.5
1870 Female, age 42, unknown 39.4
2411 Female, age 72, unknown 38.8
1827 Male, age 72, unknown 38.2
2219 Male, age 76, both hemispheres 29.8
Dorsal raphe nucleus
nTPM: 38.6
2016 Female, age 72, unknown 40.8
1828 Male, age 53, unknown 39.5
2047 Male, age 72, unknown 39.5
2298 Female, age 72, unknown 37.4
2750 Male, age 76, both hemispheres 35.7
Inferior colliculus
nTPM: 36.3
1890 Male, age 53, unknown 38.3
1848 Female, age 42, unknown 37.8
2097 Female, age 72, unknown 34.6
2849 Male, age 72, unknown 34.5
Median raphe nucleus
nTPM: 41.3
2220 Male, age 76, midline 41.3
Pedunculopontine tegmental nucleus
nTPM: 43.0
2338 Male, age 61, both hemispheres 57.3
2334 Male, age 80, both hemispheres 39.4
1921 Female, age 85, both hemispheres 32.2
Periaquaductal grey, anterior
nTPM: 38.4
1795 Male, age 51, unknown 39.3
1947 Male, age 18, unknown 39.3
2502 Female, age 75, unknown 36.7
Periaquaductal grey, dorsal
nTPM: 35.6
1831 Male, age 72, unknown 41.0
2464 Female, age 72, unknown 35.4
2850 Male, age 76, both hemispheres 33.4
1840 Male, age 53, unknown 32.4
Periaquaductal grey, lateral
nTPM: 35.7
2272 Male, age 74, both hemispheres 37.9
2053 Male, age 18, unknown 34.9
2140 Male, age 76, both hemispheres 34.4
Pretectal area
nTPM: 36.8
1817 Female, age 42, unknown 41.7
2007 Male, age 72, unknown 41.3
1944 Female, age 72, unknown 38.3
2407 Male, age 75, both hemispheres 37.9
2825 Male, age 18, unknown 37.0
1815 Male, age 53, unknown 36.7
2316 Male, age 76, right hemisphere 35.4
2224 Female, age 72, unknown 35.0
1816 Male, age 51, unknown 34.9
2667 Female, age 75, unknown 33.5
2273 Male, age 74, both hemispheres 33.2
Red nucleus
nTPM: 43.2
2584 Male, age 75, left hemisphere 49.2
2588 Male, age 74, left hemisphere 45.6
2785 Male, age 18, unknown 44.5
1865 Male, age 51, unknown 44.0
2769 Male, age 72, unknown 43.8
2503 Female, age 72, unknown 43.6
2227 Male, age 72, unknown 43.5
1904 Male, age 53, unknown 43.4
1954 Female, age 42, unknown 41.2
1821 Female, age 72, unknown 40.6
2725 Female, age 75, unknown 39.7
2823 Male, age 76, right hemisphere 39.1
Substantia nigra
nTPM: 41.7
2583 Male, age 75, right hemisphere 52.2
2590 Female, age 75, unknown 49.7
2665 Male, age 74, both hemispheres 49.0
1851 Male, age 51, unknown 43.7
1916 Female, age 42, unknown 43.5
2699 Male, age 18, unknown 39.7
1941 Male, age 53, unknown 38.6
1889 Female, age 72, unknown 36.0
2409 Female, age 72, unknown 32.7
2241 Male, age 72, unknown 32.3
Superior colliculus
nTPM: 38.1
2664 Male, age 75, both hemispheres 44.0
2587 Male, age 74, left hemisphere 40.8
1796 Male, age 53, unknown 39.5
2668 Female, age 75, unknown 39.1
2087 Female, age 72, unknown 39.0
1995 Male, age 72, unknown 38.8
1913 Female, age 42, unknown 38.7
1839 Male, age 51, unknown 37.3
2261 Male, age 18, unknown 35.2
1895 Male, age 76, right hemisphere 28.4
Ventral tegmental area
nTPM: 40.6
2021 Male, age 53, unknown 42.2
2410 Female, age 72, unknown 41.5
2218 Male, age 76, both hemispheres 41.1
1915 Female, age 42, unknown 40.7
1942 Male, age 51, unknown 39.6
2223 Female, age 72, unknown 38.2

MIDBRAIN - GTEx RNA-seqi
Average nTPM 40.2
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 40.2
Samples: 139

Max nTPM: 78.5
Min nTPM: 21.4
Std nTPM: 9.8
Median nTPM: 38.0
GTEX-1H23P-0011-R2a-SM-CKZP3 60-69 years, male 78.5
GTEX-NPJ8-0011-R2a-SM-2TC6M 40-49 years, male 74.7
GTEX-NL4W-0011-R2a-SM-2I5GV 50-59 years, male 67.8
GTEX-13PDP-0011-R2b-SM-5O9DH 60-69 years, male 67.6
GTEX-OXRO-0011-R2A-SM-3NB1W 60-69 years, female 66.5
GTEX-1J1OQ-0011-R2b-SM-ARU88 40-49 years, female 61.3
GTEX-XMD1-0011-R2B-SM-4AT5N 60-69 years, male 55.5
GTEX-13QJC-0011-R2b-SM-5PNUN 60-69 years, female 55.4
GTEX-14PN4-0011-R2a-SM-6EU2Y 50-59 years, male 55.3
GTEX-13SLW-0011-R2b-SM-5O9C6 70-79 years, male 55.1
GTEX-12WSD-0011-R2a-SM-5LZWB 60-69 years, female 55.0
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 78.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 78.4
FF:10158-103A5 76 years, female 78.4

MIDBRAIN - Pig RNA-seqi
Average nTPM 32.1
Pig sample Sample description nTPM
Midbrain
nTPM: 30.7
Samples: 4

Max nTPM: 33.7
Min nTPM: 24.5
Sample A Female 32.5
Sample B Female 32.0
Sample C Male 33.7
Sample D Male 24.5
Periaqueductal gray
nTPM: 28.1
Samples: 3

Max nTPM: 31.0
Min nTPM: 25.4
Sample B Female 27.9
Sample C Male 31.0
Sample D Male 25.4
Substantia nigra
nTPM: 32.2
Samples: 4

Max nTPM: 36.1
Min nTPM: 28.5
Sample A Female 36.1
Sample B Female 30.9
Sample C Male 33.1
Sample D Male 28.5
Superior colliculi
nTPM: 31.1
Samples: 4

Max nTPM: 34.7
Min nTPM: 28.7
Sample A Female 34.7
Sample B Female 30.7
Sample C Male 28.7
Sample D Male 30.2

MIDBRAIN - Mouse RNA-seqi
Average nTPM 26.8
Mouse sample Sample description nTPM
Midbrain
nTPM: 26.8
Samples: 4

Max nTPM: 27.6
Min nTPM: 25.5
Sample A Male 27.0
Sample B Male 27.6
Sample C Female 25.5
Sample D Female 27.2

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.1
68300968 Antisense, RP_041129_02_E06, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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