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IL13RA1
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:16.2 nTPM
HPA:16.2 nTPM
GTEx:12.9 nTPM
FANTOM5:30.7 Scaled Tags Per Million
Pig:21.5 nTPM
Mouse:11.6 nTPM
Allen mouse:0.2 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 16.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 13.8
1857 Female, age 85, left hemisphere 14.9
2481 Female, age 94, left hemisphere 14.6
2846 Female, age 79, unknown 14.4
1854 Male, age 80, left hemisphere 14.1
2289 Male, age 61, right hemisphere 13.6
2290 Female, age 72, unknown 13.6
1781 Male, age 74, unknown 12.6
2288 Male, age 75, left hemisphere 12.6
Claustrum
nTPM: 11.4
2196 Female, age 79, unknown 14.0
2292 Female, age 85, both hemispheres 12.4
2198 Male, age 80, both hemispheres 12.3
1956 Male, age 74, unknown 11.6
2392 Female, age 94, both hemispheres 11.3
2284 Female, age 91, both hemispheres 10.6
2645 Female, age 72, unknown 10.5
2491 Male, age 75, both hemispheres 10.1
2568 Male, age 61, both hemispheres 9.5
Globus pallidus, externus
nTPM: 16.1
1996 Male, age 80, right hemisphere 19.2
2772 Female, age 79, unknown 17.2
2395 Male, age 75, both hemispheres 16.4
2567 Female, age 72, unknown 14.3
2646 Male, age 61, right hemisphere 13.4
Globus pallidus, internus
nTPM: 16.2
2037 Male, age 80, right hemisphere 18.9
2778 Female, age 91, both hemispheres 17.4
1818 Male, age 74, unknown 17.0
2566 Female, age 72, unknown 15.2
2287 Male, age 75, right hemisphere 15.1
2483 Female, age 94, right hemisphere 15.1
2111 Female, age 85, right hemisphere 14.8
Nucleus accumbens
nTPM: 13.1
2732 Male, age 80, right hemisphere 15.0
2391 Female, age 94, left hemisphere 14.6
2698 Female, age 72, unknown 14.2
1806 Female, age 85, left hemisphere 13.1
1856 Female, age 91, right hemisphere 12.7
2286 Male, age 75, left hemisphere 12.6
1783 Male, age 74, unknown 12.2
2824 Male, age 61, right hemisphere 9.9
Nucleus basalis of Meynert
nTPM: 15.6
2484 Female, age 94, left hemisphere 16.9
2393 Male, age 80, right hemisphere 15.9
2821 Male, age 75, both hemispheres 15.4
2569 Male, age 61, both hemispheres 14.3
Nucleus of the diagonal band
nTPM: 11.4
1812 Female, age 91, both hemispheres 13.7
1979 Male, age 74, unknown 12.0
2775 Male, age 80, right hemisphere 11.3
2195 Female, age 85, both hemispheres 10.3
2029 Male, age 61, right hemisphere 10.0
Olfactory tubercle
nTPM: 11.3
1846 Male, age 80, right hemisphere 13.2
2487 Female, age 94, left hemisphere 11.4
2856 Male, age 75, right hemisphere 11.4
1998 Female, age 91, both hemispheres 9.3
Putamen
nTPM: 13.2
2482 Female, age 94, left hemisphere 16.2
2489 Female, age 72, unknown 14.6
1829 Male, age 74, unknown 13.5
1937 Female, age 91, right hemisphere 13.1
2466 Female, age 79, unknown 12.5
1838 Male, age 80, right hemisphere 11.8
2647 Male, age 75, left hemisphere 11.0
Septal nuclei
nTPM: 12.7
2199 Male, age 80, right hemisphere 17.5
2394 Male, age 61, left hemisphere 14.3
2009 Female, age 91, both hemispheres 12.4
2059 Female, age 85, both hemispheres 12.0
2629 Female, age 94, right hemisphere 11.5
2031 Female, age 72, unknown 10.7
1960 Male, age 74, unknown 10.2

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 12.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 12.6
Samples: 246

Max nTPM: 43.8
Min nTPM: 3.9
Std nTPM: 6.2
Median nTPM: 11.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 43.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 33.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 32.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 32.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 31.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 29.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 28.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 27.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 27.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 25.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 24.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 9.6
Samples: 246

Max nTPM: 46.4
Min nTPM: 2.9
Std nTPM: 6.0
Median nTPM: 7.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 46.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 36.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 28.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 26.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 25.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 25.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 24.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 24.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 23.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 23.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 23.5
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Brain - Putamen (basal ganglia)
Average nTPM: 12.9
Samples: 205

Max nTPM: 55.7
Min nTPM: 3.7
Std nTPM: 6.7
Median nTPM: 11.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 55.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 41.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 38.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 31.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 31.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 30.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 29.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 27.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 26.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 25.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 24.0
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 25.0
FF:10164-103B2 76 years, female 25.0
Globus pallidus
Scaled Tags Per Million: 30.7
FF:10161-103A8 76 years, female 37.0
FF:10175-103C4 60 years, female 24.4
Nucleus accumbens
Scaled Tags Per Million: 14.3
FF:10037-101F1 23-56 years, mixed 14.3
Putamen
Scaled Tags Per Million: 13.0
FF:10176-103C5 60 years, female 13.0

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 21.5
Pig sample Sample description nTPM
Caudate
nTPM: 12.2
Samples: 4

Max nTPM: 14.2
Min nTPM: 10.5
Sample A Female 13.6
Sample B Female 10.6
Sample C Male 14.2
Sample D Male 10.5
Putamen
nTPM: 18.4
Samples: 4

Max nTPM: 26.4
Min nTPM: 13.7
Sample A Female 18.6
Sample B Female 13.7
Sample C Male 26.4
Sample D Male 15.0
Septum
nTPM: 21.5
Samples: 4

Max nTPM: 32.0
Min nTPM: 13.9
Sample A Female 21.0
Sample B Female 13.9
Sample C Male 32.0
Sample D Male 18.9
Ventral pallidum
nTPM: 14.4
Samples: 4

Max nTPM: 17.6
Min nTPM: 11.8
Sample A Female 11.8
Sample B Female 15.3
Sample C Male 17.6
Sample D Male 12.9

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 11.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 6.8
Samples: 4

Max nTPM: 7.4
Min nTPM: 6.2
Sample A Male 6.9
Sample B Male 6.7
Sample C Female 6.2
Sample D Female 7.4
Septum
nTPM: 11.6
Samples: 4

Max nTPM: 12.1
Min nTPM: 10.8
Sample A Male 12.0
Sample B Male 12.1
Sample C Female 11.4
Sample D Female 10.8
Ventral forebrain
nTPM: 9.3
Samples: 4

Max nTPM: 10.3
Min nTPM: 8.4
Sample A Male 8.4
Sample B Male 10.3
Sample C Female 9.8
Sample D Female 8.5

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
68745012 Antisense, RP_050210_01_B01, Mouse strain C57BL/6J (56 days, male) 0.2
74819256 Antisense, RP_060315_02_D08, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.2
68745012 Antisense, RP_050210_01_B01, Mouse strain C57BL/6J (56 days, male) 0.4
74819256 Antisense, RP_060315_02_D08, Mouse strain C57BL/6J (56 days, male) 0.0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.