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PDHA1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:68.2 nTPM
HPA:68.2 nTPM
GTEx:63.5 nTPM
FANTOM5:69.1 Scaled Tags Per Million
Pig:50.1 nTPM
Mouse:201.1 nTPM
Allen mouse:12.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047487Antibody HPA047864Antibody HPA063053
Glial cells Not detectedNot detectedLow
Neuronal cells LowLowHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 68.2
Sample id Sample description nTPM
Hippocampus
nTPM: 64.4
1898 Male, age 80, left hemisphere 69.3
1855 Male, age 76, left hemisphere 67.6
2621 Female, age 67, right hemisphere 66.4
2148 Female, age 91, left hemisphere 61.4
2529 Female, age 94, left hemisphere 61.3
1911 Female, age 85, right hemisphere 60.3
Dentate gyrus
nTPM: 63.3
2010 Male, age 76, both hemispheres 72.8
1927 Female, age 91, both hemispheres 65.1
2530 Female, age 94, left hemisphere 64.2
2246 Female, age 85, both hemispheres 62.0
2531 Female, age 67, both hemispheres 59.0
2528 Male, age 74, both hemispheres 56.9
Entorhinal gyrus
nTPM: 64.3
2764 Male, age 80, right hemisphere 68.2
1938 Female, age 85, left hemisphere 67.3
2686 Male, age 75, right hemisphere 65.3
1787 Male, age 76, left hemisphere 64.3
2613 Female, age 94, left hemisphere 61.8
2117 Female, age 91, right hemisphere 58.5
Hippocampus, CA1
nTPM: 68.2
2749 Male, age 80, left hemisphere 84.4
1873 Female, age 85, both hemispheres 69.1
2045 Male, age 76, both hemispheres 66.2
2527 Male, age 74, both hemispheres 62.5
2082 Female, age 91, right hemisphere 58.6
Hippocampus, CA2
nTPM: 65.4
1892 Male, age 76, both hemispheres 74.5
1963 Male, age 80, left hemisphere 73.9
2249 Male, age 74, both hemispheres 63.5
2437 Female, age 94, left hemisphere 63.0
2113 Female, age 91, right hemisphere 59.0
1940 Female, age 85, left hemisphere 58.8
Hippocampus, CA3
nTPM: 66.1
2436 Male, age 74, both hemispheres 75.2
1867 Male, age 76, both hemispheres 70.4
2137 Male, age 80, left hemisphere 68.0
2861 Female, age 67, both hemispheres 61.7
1891 Female, age 85, both hemispheres 61.4
2620 Female, age 94, left hemisphere 59.8
Parahippocampal cortex
nTPM: 65.1
1850 Male, age 80, both hemispheres 67.6
1933 Female, age 85, both hemispheres 67.4
2532 Female, age 72, left hemisphere 66.3
2622 Female, age 67, right hemisphere 66.2
2245 Female, age 91, both hemispheres 64.8
2250 Female, age 67, right hemisphere 64.7
2018 Male, age 76, both hemispheres 64.3
2693 Female, age 94, both hemispheres 64.2
1990 Female, age 91, right hemisphere 63.5
2692 Male, age 74, both hemispheres 62.5
Perirhinal gyrus
nTPM: 65.6
1847 Female, age 91, left hemisphere 66.8
1794 Male, age 80, right hemisphere 66.1
2521 Female, age 94, right hemisphere 65.8
1841 Female, age 85, right hemisphere 65.3
2848 Male, age 76, right hemisphere 64.0
Subiculum
nTPM: 61.7
1901 Male, age 80, both hemispheres 65.8
1977 Female, age 85, both hemispheres 63.4
2438 Female, age 94, left hemisphere 63.4
2619 Male, age 74, both hemispheres 61.4
2042 Male, age 76, both hemispheres 60.6
2729 Female, age 91, right hemisphere 55.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.5
Samples: 197

Max nTPM: 121.8
Min nTPM: 26.7
Std nTPM: 18.4
Median nTPM: 59.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 121.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 115.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 112.9
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 112.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 112.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 112.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 108.6
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 99.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 97.8
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 97.6
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 97.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.1
FF:10169-103B7 60 years, female 88.9
FF:10153-102I9 76 years, female 49.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 50.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 49.0
Samples: 4

Max nTPM: 58.6
Min nTPM: 38.7
Sample A Female 58.6
Sample B Female 48.6
Sample C Male 49.9
Sample D Male 38.7
Entorhinal cortex
nTPM: 50.1
Samples: 4

Max nTPM: 60.5
Min nTPM: 42.7
Sample A Female 49.1
Sample B Female 60.5
Sample C Male 48.1
Sample D Male 42.7
Subiculum
nTPM: 47.9
Samples: 4

Max nTPM: 59.5
Min nTPM: 40.9
Sample A Female 59.5
Sample B Female 46.4
Sample C Male 44.6
Sample D Male 40.9
Ventral hippocampus
nTPM: 45.1
Samples: 4

Max nTPM: 48.8
Min nTPM: 38.7
Sample A Female 47.8
Sample B Female 38.7
Sample C Male 48.8
Sample D Male 45.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 201.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 201.0
Samples: 4

Max nTPM: 212.1
Min nTPM: 193.8
Sample A Male 193.8
Sample B Male 200.5
Sample C Female 197.6
Sample D Female 212.1
Hippocampal formation
nTPM: 201.1
Samples: 4

Max nTPM: 211.1
Min nTPM: 186.1
Sample A Male 207.9
Sample B Male 199.3
Sample C Female 211.1
Sample D Female 186.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.3
293257 Antisense, RP_040617_01_A04, Mouse strain C57BL/6J (56 days, male) 12.3
323397 Antisense, RP_040617_01_A04, Mouse strain C57BL/6J (56 days, male) 8.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.