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SLC6A11
AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		112.560
RNA expressioni
Consensus:50.5 nTPM
HPA:50.5 nTPM
GTEx:15.1 nTPM
FANTOM5:41.3 Scaled Tags Per Million
Pig:55.0 nTPM
Mouse:106.9 nTPM
Allen mouse:2.6 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA037981
Amygdala mean intensity 112.560
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 47.460
Basal medial amygdaloid nucleus 112.560
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 73.240
Cortical amygdala 105.901
Central amygdala -
Medial amygdaloid nucleus 104.640

AMYGDALA - HPA Brain RNA-seq
Max nTPM 50.5
Sample id Sample description nTPM
Amygdala
nTPM: 50.5
2695 Female, age 67, right hemisphere 105.6
2814 Male, age 76, right hemisphere 66.2
2514 Male, age 75, right hemisphere 31.5
1987 Female, age 91, left hemisphere 26.7
2517 Female, age 94, left hemisphere 22.3
Basal amygdala
nTPM: 28.8
2609 Male, age 75, right hemisphere 46.1
1955 Male, age 76, both hemispheres 43.3
2243 Female, age 91, right hemisphere 29.8
2685 Female, age 94, left hemisphere 19.6
2110 Male, age 80, left hemisphere 18.3
2827 Female, age 67, right hemisphere 15.9
Central amygdala
nTPM: 43.8
1905 Male, age 76, both hemispheres 80.8
2515 Male, age 75, right hemisphere 54.6
2701 Female, age 91, right hemisphere 40.0
2239 Male, age 80, left hemisphere 24.1
2826 Female, age 94, left hemisphere 19.4
Corticomedial amygdala
nTPM: 30.8
2428 Male, age 75, right hemisphere 44.1
2240 Male, age 76, both hemispheres 37.0
2242 Female, age 91, right hemisphere 33.4
2829 Male, age 80, left hemisphere 31.6
2429 Female, age 94, left hemisphere 22.9
2535 Female, age 67, right hemisphere 16.1
Lateral amygdala
nTPM: 29.7
1883 Male, age 76, both hemispheres 72.1
2516 Male, age 75, right hemisphere 30.9
2255 Female, age 91, right hemisphere 21.9
2534 Female, age 94, left hemisphere 18.7
2256 Male, age 80, left hemisphere 18.6
2830 Female, age 67, right hemisphere 15.6
Stria terminalis, bed nucleus
nTPM: 37.9
2201 Male, age 74, unknown 69.6
2486 Female, age 94, both hemispheres 23.4
1974 Female, age 91, both hemispheres 20.5

AMYGDALA - GTEx RNA-seqi
Average nTPM 15.1
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 15.1
Samples: 152

Max nTPM: 59.2
Min nTPM: 1.1
Std nTPM: 8.8
Median nTPM: 13.1
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 59.2
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 40.4
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 36.4
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 32.6
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 32.2
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 31.8
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 31.6
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 31.5
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 31.4
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 31.0
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 30.7
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 41.3
FF:10151-102I7 76 years, female 41.3

AMYGDALA - Pig RNA-seqi
Average nTPM 55.0
Pig sample Sample description nTPM
Amygdala
nTPM: 55.0
Samples: 4

Max nTPM: 62.3
Min nTPM: 42.6
Sample A Female 62.3
Sample B Female 42.6
Sample C Male 54.3
Sample D Male 60.8

AMYGDALA - Mouse RNA-seqi
Average nTPM 106.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 106.9
Samples: 4

Max nTPM: 122.3
Min nTPM: 89.7
Sample A Male 122.3
Sample B Male 89.7
Sample C Female 112.1
Sample D Female 103.5

AMYGDALA - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 2.6
69672725 Antisense, RP_050428_04_D04, Mouse strain C57BL/6J (56 days, male) 2.9
72472802 Antisense, RP_051101_02_F06, Mouse strain C57BL/6J (56 days, male) 2.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.