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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:21.2 nTPM
HPA:21.2 nTPM
GTEx:11.5 nTPM
FANTOM5:40.7 Scaled Tags Per Million
Pig:2.1 nTPM
Mouse:0.6 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.2
Sample id Sample description nTPM
Hippocampus
nTPM: 20.6
2529 Female, age 94, left hemisphere 25.0
2148 Female, age 91, left hemisphere 21.7
1911 Female, age 85, right hemisphere 20.5
2621 Female, age 67, right hemisphere 20.5
1855 Male, age 76, left hemisphere 18.7
1898 Male, age 80, left hemisphere 17.1
Dentate gyrus
nTPM: 19.3
2531 Female, age 67, both hemispheres 23.5
2528 Male, age 74, both hemispheres 21.3
2246 Female, age 85, both hemispheres 20.3
2010 Male, age 76, both hemispheres 17.5
1927 Female, age 91, both hemispheres 16.8
2530 Female, age 94, left hemisphere 16.3
Entorhinal gyrus
nTPM: 17.5
2613 Female, age 94, left hemisphere 20.5
2686 Male, age 75, right hemisphere 19.0
2117 Female, age 91, right hemisphere 17.1
1787 Male, age 76, left hemisphere 16.5
1938 Female, age 85, left hemisphere 16.0
2764 Male, age 80, right hemisphere 15.9
Hippocampus, CA1
nTPM: 19.4
2527 Male, age 74, both hemispheres 25.5
2082 Female, age 91, right hemisphere 19.8
1873 Female, age 85, both hemispheres 18.7
2045 Male, age 76, both hemispheres 17.7
2749 Male, age 80, left hemisphere 15.4
Hippocampus, CA2
nTPM: 19.1
2249 Male, age 74, both hemispheres 22.1
1940 Female, age 85, left hemisphere 21.7
2113 Female, age 91, right hemisphere 21.6
2437 Female, age 94, left hemisphere 17.7
1963 Male, age 80, left hemisphere 17.1
1892 Male, age 76, both hemispheres 14.7
Hippocampus, CA3
nTPM: 21.2
2620 Female, age 94, left hemisphere 28.5
2861 Female, age 67, both hemispheres 24.3
2436 Male, age 74, both hemispheres 21.8
1891 Female, age 85, both hemispheres 19.1
2137 Male, age 80, left hemisphere 18.1
1867 Male, age 76, both hemispheres 15.4
Parahippocampal cortex
nTPM: 18.7
2692 Male, age 74, both hemispheres 22.9
2622 Female, age 67, right hemisphere 21.7
2245 Female, age 91, both hemispheres 20.2
2250 Female, age 67, right hemisphere 20.0
2693 Female, age 94, both hemispheres 19.0
2018 Male, age 76, both hemispheres 17.9
1850 Male, age 80, both hemispheres 17.1
1933 Female, age 85, both hemispheres 16.9
1990 Female, age 91, right hemisphere 16.3
2532 Female, age 72, left hemisphere 15.1
Perirhinal gyrus
nTPM: 16.7
2521 Female, age 94, right hemisphere 17.9
1841 Female, age 85, right hemisphere 17.1
1847 Female, age 91, left hemisphere 16.8
2848 Male, age 76, right hemisphere 16.2
1794 Male, age 80, right hemisphere 15.7
Subiculum
nTPM: 18.6
2619 Male, age 74, both hemispheres 21.9
2729 Female, age 91, right hemisphere 20.6
2438 Female, age 94, left hemisphere 19.5
2042 Male, age 76, both hemispheres 17.3
1901 Male, age 80, both hemispheres 16.2
1977 Female, age 85, both hemispheres 15.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.5
Samples: 197

Max nTPM: 44.3
Min nTPM: 2.7
Std nTPM: 6.6
Median nTPM: 9.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 44.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 43.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 37.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 32.9
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 28.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 28.6
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 27.5
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 26.1
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 25.2
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 24.8
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 24.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.7
FF:10153-102I9 76 years, female 48.0
FF:10169-103B7 60 years, female 33.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.2
Samples: 4

Max nTPM: 3.1
Min nTPM: 0.6
Sample A Female 2.9
Sample B Female 2.0
Sample C Male 3.1
Sample D Male 0.6
Entorhinal cortex
nTPM: 0.2
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.1
Sample A Female 0.1
Sample B Female 0.2
Sample C Male 0.2
Sample D Male 0.1
Subiculum
nTPM: 0.9
Samples: 4

Max nTPM: 1.5
Min nTPM: 0.5
Sample A Female 0.5
Sample B Female 1.0
Sample C Male 0.6
Sample D Male 1.5
Ventral hippocampus
nTPM: 1.8
Samples: 4

Max nTPM: 2.3
Min nTPM: 1.0
Sample A Female 1.7
Sample B Female 1.0
Sample C Male 2.2
Sample D Male 2.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0
Hippocampal formation
nTPM: 0.6
Samples: 4

Max nTPM: 0.9
Min nTPM: 0.3
Sample A Male 0.5
Sample B Male 0.8
Sample C Female 0.3
Sample D Female 0.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
74514282 Antisense, RP_060208_02_C05, Mouse strain C57BL/6J (56 days, male) 0.2
74579987 Antisense, RP_060215_01_F01, Mouse strain C57BL/6J (56 days, male) 0.1

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