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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:14.2 nTPM
HPA:14.2 nTPM
GTEx:11.8 nTPM
FANTOM5:41.1 Scaled Tags Per Million
Pig:14.4 nTPM
Mouse:17.6 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015870Antibody HPA021872
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.2
Sample id Sample description nTPM
Hippocampus
nTPM: 12.8
1855 Male, age 76, left hemisphere 16.1
1898 Male, age 80, left hemisphere 14.1
2621 Female, age 67, right hemisphere 13.7
1911 Female, age 85, right hemisphere 12.0
2148 Female, age 91, left hemisphere 11.4
2529 Female, age 94, left hemisphere 9.7
Dentate gyrus
nTPM: 13.8
2530 Female, age 94, left hemisphere 15.7
2010 Male, age 76, both hemispheres 14.9
2246 Female, age 85, both hemispheres 14.2
2531 Female, age 67, both hemispheres 14.0
1927 Female, age 91, both hemispheres 13.5
2528 Male, age 74, both hemispheres 10.4
Entorhinal gyrus
nTPM: 9.6
1787 Male, age 76, left hemisphere 11.0
2613 Female, age 94, left hemisphere 11.0
1938 Female, age 85, left hemisphere 9.3
2686 Male, age 75, right hemisphere 8.9
2764 Male, age 80, right hemisphere 8.8
2117 Female, age 91, right hemisphere 8.3
Hippocampus, CA1
nTPM: 14.2
2749 Male, age 80, left hemisphere 20.9
1873 Female, age 85, both hemispheres 14.9
2082 Female, age 91, right hemisphere 12.8
2045 Male, age 76, both hemispheres 11.8
2527 Male, age 74, both hemispheres 10.5
Hippocampus, CA2
nTPM: 13.4
1892 Male, age 76, both hemispheres 19.8
1963 Male, age 80, left hemisphere 16.7
2113 Female, age 91, right hemisphere 12.0
2437 Female, age 94, left hemisphere 11.3
2249 Male, age 74, both hemispheres 11.1
1940 Female, age 85, left hemisphere 9.4
Hippocampus, CA3
nTPM: 14.1
2137 Male, age 80, left hemisphere 21.7
1867 Male, age 76, both hemispheres 16.6
2620 Female, age 94, left hemisphere 14.8
2861 Female, age 67, both hemispheres 12.8
1891 Female, age 85, both hemispheres 9.3
2436 Male, age 74, both hemispheres 9.1
Parahippocampal cortex
nTPM: 10.1
2250 Female, age 67, right hemisphere 14.8
2018 Male, age 76, both hemispheres 11.7
2245 Female, age 91, both hemispheres 11.7
2693 Female, age 94, both hemispheres 10.9
2622 Female, age 67, right hemisphere 9.6
1933 Female, age 85, both hemispheres 9.1
2532 Female, age 72, left hemisphere 9.0
2692 Male, age 74, both hemispheres 8.7
1990 Female, age 91, right hemisphere 8.4
1850 Male, age 80, both hemispheres 6.9
Perirhinal gyrus
nTPM: 8.7
2521 Female, age 94, right hemisphere 10.6
2848 Male, age 76, right hemisphere 9.3
1847 Female, age 91, left hemisphere 9.0
1794 Male, age 80, right hemisphere 7.4
1841 Female, age 85, right hemisphere 7.3
Subiculum
nTPM: 10.5
1901 Male, age 80, both hemispheres 13.1
2042 Male, age 76, both hemispheres 11.7
2729 Female, age 91, right hemisphere 11.0
1977 Female, age 85, both hemispheres 10.5
2619 Male, age 74, both hemispheres 9.8
2438 Female, age 94, left hemisphere 7.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.8
Samples: 197

Max nTPM: 26.8
Min nTPM: 6.2
Std nTPM: 3.3
Median nTPM: 11.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 26.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 23.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 21.7
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 19.3
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 18.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 18.6
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 18.3
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 18.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 17.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 17.8
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 17.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.1
FF:10169-103B7 60 years, female 51.2
FF:10153-102I9 76 years, female 31.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.5
Samples: 4

Max nTPM: 17.3
Min nTPM: 11.1
Sample A Female 15.5
Sample B Female 17.3
Sample C Male 11.1
Sample D Male 13.9
Entorhinal cortex
nTPM: 10.6
Samples: 4

Max nTPM: 12.3
Min nTPM: 9.3
Sample A Female 10.8
Sample B Female 9.3
Sample C Male 12.3
Sample D Male 10.1
Subiculum
nTPM: 11.3
Samples: 4

Max nTPM: 13.6
Min nTPM: 8.8
Sample A Female 12.1
Sample B Female 8.8
Sample C Male 13.6
Sample D Male 10.8
Ventral hippocampus
nTPM: 13.6
Samples: 4

Max nTPM: 16.7
Min nTPM: 11.8
Sample A Female 12.3
Sample B Female 11.8
Sample C Male 16.7
Sample D Male 13.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.1
Samples: 4

Max nTPM: 18.1
Min nTPM: 9.5
Sample A Male 12.4
Sample B Male 9.5
Sample C Female 16.5
Sample D Female 18.1
Hippocampal formation
nTPM: 17.6
Samples: 4

Max nTPM: 20.6
Min nTPM: 14.4
Sample A Male 14.4
Sample B Male 20.6
Sample C Female 18.9
Sample D Female 16.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
69817733 Antisense, RP_050510_03_F07, Mouse strain C57BL/6J (56 days, male) 3.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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