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SERPINF1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:85.4 nTPM
HPA:85.4 nTPM
GTEx:20.1 nTPM
FANTOM5:96.2 Scaled Tags Per Million
Pig:24.6 nTPM
Mouse:14.6 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005825
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 85.4
Sample id Sample description nTPM
Hippocampus
nTPM: 7.0
1898 Male, age 80, left hemisphere 21.3
1855 Male, age 76, left hemisphere 13.9
2621 Female, age 67, right hemisphere 7.3
1911 Female, age 85, right hemisphere 0.0
2148 Female, age 91, left hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 10.1
2010 Male, age 76, both hemispheres 33.4
2530 Female, age 94, left hemisphere 16.6
2246 Female, age 85, both hemispheres 7.6
2531 Female, age 67, both hemispheres 3.0
1927 Female, age 91, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
Entorhinal gyrus
nTPM: 5.5
2764 Male, age 80, right hemisphere 11.8
1938 Female, age 85, left hemisphere 6.9
2613 Female, age 94, left hemisphere 5.6
1787 Male, age 76, left hemisphere 3.9
2686 Male, age 75, right hemisphere 3.4
2117 Female, age 91, right hemisphere 1.4
Hippocampus, CA1
nTPM: 7.4
2527 Male, age 74, both hemispheres 15.7
1873 Female, age 85, both hemispheres 7.6
2082 Female, age 91, right hemisphere 7.5
2749 Male, age 80, left hemisphere 6.5
2045 Male, age 76, both hemispheres 0.0
Hippocampus, CA2
nTPM: 20.8
2249 Male, age 74, both hemispheres 104.5
1963 Male, age 80, left hemisphere 7.2
1940 Female, age 85, left hemisphere 7.1
2113 Female, age 91, right hemisphere 4.0
2437 Female, age 94, left hemisphere 1.9
1892 Male, age 76, both hemispheres 0.0
Hippocampus, CA3
nTPM: 85.4
2436 Male, age 74, both hemispheres 507.4
2861 Female, age 67, both hemispheres 5.3
1867 Male, age 76, both hemispheres 0.0
1891 Female, age 85, both hemispheres 0.0
2137 Male, age 80, left hemisphere 0.0
2620 Female, age 94, left hemisphere 0.0
Parahippocampal cortex
nTPM: 9.6
1933 Female, age 85, both hemispheres 19.1
1850 Male, age 80, both hemispheres 17.4
2622 Female, age 67, right hemisphere 13.7
2250 Female, age 67, right hemisphere 11.6
2532 Female, age 72, left hemisphere 11.2
2693 Female, age 94, both hemispheres 11.0
2018 Male, age 76, both hemispheres 9.3
2245 Female, age 91, both hemispheres 2.2
1990 Female, age 91, right hemisphere 0.9
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 16.6
1794 Male, age 80, right hemisphere 23.1
1841 Female, age 85, right hemisphere 22.7
1847 Female, age 91, left hemisphere 15.4
2848 Male, age 76, right hemisphere 14.3
2521 Female, age 94, right hemisphere 7.3
Subiculum
nTPM: 2.3
2438 Female, age 94, left hemisphere 7.7
1977 Female, age 85, both hemispheres 6.1
1901 Male, age 80, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.1
Samples: 197

Max nTPM: 142.6
Min nTPM: 2.1
Std nTPM: 22.1
Median nTPM: 11.8
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 142.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 131.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 124.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 97.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 91.3
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 90.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 81.8
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 65.0
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 59.5
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 57.1
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 53.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 96.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 96.2
FF:10153-102I9 76 years, female 123.4
FF:10169-103B7 60 years, female 69.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.4
Samples: 4

Max nTPM: 24.2
Min nTPM: 12.9
Sample A Female 22.1
Sample B Female 12.9
Sample C Male 22.5
Sample D Male 24.2
Entorhinal cortex
nTPM: 24.6
Samples: 4

Max nTPM: 30.2
Min nTPM: 13.6
Sample A Female 29.5
Sample B Female 25.2
Sample C Male 30.2
Sample D Male 13.6
Subiculum
nTPM: 15.6
Samples: 4

Max nTPM: 25.7
Min nTPM: 6.6
Sample A Female 17.5
Sample B Female 6.6
Sample C Male 12.6
Sample D Male 25.7
Ventral hippocampus
nTPM: 14.5
Samples: 4

Max nTPM: 22.4
Min nTPM: 8.6
Sample A Female 9.7
Sample B Female 8.6
Sample C Male 17.3
Sample D Male 22.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.3
Samples: 4

Max nTPM: 14.9
Min nTPM: 11.1
Sample A Male 11.1
Sample B Male 11.2
Sample C Female 14.9
Sample D Female 12.0
Hippocampal formation
nTPM: 14.7
Samples: 4

Max nTPM: 18.3
Min nTPM: 11.0
Sample A Male 11.0
Sample B Male 14.3
Sample C Female 15.0
Sample D Female 18.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
671244 Antisense, RP_040914_02_B02, Mouse strain C57BL/6J (56 days, male) 1.0
2559 Antisense, RP_Baylor_103024, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.