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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:89.2 nTPM
HPA:89.2 nTPM
GTEx:56.7 nTPM
FANTOM5:102.6 Scaled Tags Per Million
Pig:9.5 nTPM
Mouse:69.1 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022856Antibody HPA023489
Glial cells Not detectedLow
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 89.2
Sample id Sample description nTPM
Hippocampus
nTPM: 89.2
2529 Female, age 94, left hemisphere 92.9
1911 Female, age 85, right hemisphere 90.6
2148 Female, age 91, left hemisphere 89.5
1898 Male, age 80, left hemisphere 89.3
1855 Male, age 76, left hemisphere 88.1
2621 Female, age 67, right hemisphere 84.9
Dentate gyrus
nTPM: 86.2
2528 Male, age 74, both hemispheres 90.2
2246 Female, age 85, both hemispheres 88.6
1927 Female, age 91, both hemispheres 86.8
2530 Female, age 94, left hemisphere 84.7
2010 Male, age 76, both hemispheres 84.0
2531 Female, age 67, both hemispheres 82.6
Entorhinal gyrus
nTPM: 86.8
1938 Female, age 85, left hemisphere 90.4
2117 Female, age 91, right hemisphere 89.6
2764 Male, age 80, right hemisphere 85.8
1787 Male, age 76, left hemisphere 85.2
2686 Male, age 75, right hemisphere 85.1
2613 Female, age 94, left hemisphere 84.7
Hippocampus, CA1
nTPM: 88.4
2527 Male, age 74, both hemispheres 94.4
1873 Female, age 85, both hemispheres 90.3
2082 Female, age 91, right hemisphere 87.1
2749 Male, age 80, left hemisphere 86.3
2045 Male, age 76, both hemispheres 84.1
Hippocampus, CA2
nTPM: 87.9
2249 Male, age 74, both hemispheres 91.6
2113 Female, age 91, right hemisphere 89.3
1940 Female, age 85, left hemisphere 89.0
1963 Male, age 80, left hemisphere 86.4
2437 Female, age 94, left hemisphere 85.9
1892 Male, age 76, both hemispheres 85.2
Hippocampus, CA3
nTPM: 87.4
1891 Female, age 85, both hemispheres 92.1
2436 Male, age 74, both hemispheres 91.9
2137 Male, age 80, left hemisphere 86.3
1867 Male, age 76, both hemispheres 86.1
2861 Female, age 67, both hemispheres 84.2
2620 Female, age 94, left hemisphere 84.0
Parahippocampal cortex
nTPM: 88.2
2250 Female, age 67, right hemisphere 91.5
1933 Female, age 85, both hemispheres 90.5
2692 Male, age 74, both hemispheres 90.4
1990 Female, age 91, right hemisphere 89.1
1850 Male, age 80, both hemispheres 88.3
2245 Female, age 91, both hemispheres 88.2
2622 Female, age 67, right hemisphere 87.2
2693 Female, age 94, both hemispheres 86.6
2532 Female, age 72, left hemisphere 85.4
2018 Male, age 76, both hemispheres 84.6
Perirhinal gyrus
nTPM: 87.9
1847 Female, age 91, left hemisphere 90.8
1841 Female, age 85, right hemisphere 89.3
2521 Female, age 94, right hemisphere 87.6
1794 Male, age 80, right hemisphere 86.3
2848 Male, age 76, right hemisphere 85.6
Subiculum
nTPM: 88.3
2729 Female, age 91, right hemisphere 91.6
2619 Male, age 74, both hemispheres 91.1
1901 Male, age 80, both hemispheres 88.5
1977 Female, age 85, both hemispheres 87.8
2438 Female, age 94, left hemisphere 87.3
2042 Male, age 76, both hemispheres 83.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.7
Samples: 197

Max nTPM: 195.5
Min nTPM: 16.0
Std nTPM: 24.8
Median nTPM: 50.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 195.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 152.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 130.8
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 126.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 123.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 115.4
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 114.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 113.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 106.3
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 102.1
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 100.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 102.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 102.6
FF:10169-103B7 60 years, female 107.7
FF:10153-102I9 76 years, female 97.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.9
Samples: 4

Max nTPM: 10.1
Min nTPM: 7.6
Sample A Female 10.1
Sample B Female 7.6
Sample C Male 10.0
Sample D Male 7.7
Entorhinal cortex
nTPM: 9.5
Samples: 4

Max nTPM: 10.6
Min nTPM: 8.6
Sample A Female 8.6
Sample B Female 10.6
Sample C Male 9.5
Sample D Male 9.3
Subiculum
nTPM: 7.9
Samples: 4

Max nTPM: 9.3
Min nTPM: 6.7
Sample A Female 9.3
Sample B Female 7.1
Sample C Male 6.7
Sample D Male 8.3
Ventral hippocampus
nTPM: 7.5
Samples: 4

Max nTPM: 8.3
Min nTPM: 6.3
Sample A Female 7.8
Sample B Female 7.6
Sample C Male 6.3
Sample D Male 8.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 69.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 63.6
Samples: 4

Max nTPM: 70.6
Min nTPM: 52.2
Sample A Male 70.6
Sample B Male 61.6
Sample C Female 70.0
Sample D Female 52.2
Hippocampal formation
nTPM: 69.1
Samples: 4

Max nTPM: 75.4
Min nTPM: 64.4
Sample A Male 75.4
Sample B Male 66.9
Sample C Female 64.4
Sample D Female 69.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
76003665 Antisense, RP_060608_03_A06, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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