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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:14.9 nTPM
HPA:14.9 nTPM
GTEx:10.8 nTPM
FANTOM5:14.7 Scaled Tags Per Million
Pig:23.0 nTPM
Mouse:84.4 nTPM
Allen mouse:3.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.9
Sample id Sample description nTPM
Hippocampus
nTPM: 13.9
1898 Male, age 80, left hemisphere 14.9
2621 Female, age 67, right hemisphere 14.2
1855 Male, age 76, left hemisphere 14.1
2148 Female, age 91, left hemisphere 14.1
2529 Female, age 94, left hemisphere 13.3
1911 Female, age 85, right hemisphere 12.8
Dentate gyrus
nTPM: 14.2
2528 Male, age 74, both hemispheres 17.5
2010 Male, age 76, both hemispheres 14.5
1927 Female, age 91, both hemispheres 14.4
2531 Female, age 67, both hemispheres 13.1
2246 Female, age 85, both hemispheres 12.9
2530 Female, age 94, left hemisphere 12.6
Entorhinal gyrus
nTPM: 13.9
1938 Female, age 85, left hemisphere 14.8
2613 Female, age 94, left hemisphere 14.4
2117 Female, age 91, right hemisphere 14.3
2764 Male, age 80, right hemisphere 14.2
1787 Male, age 76, left hemisphere 13.4
2686 Male, age 75, right hemisphere 12.2
Hippocampus, CA1
nTPM: 14.9
2749 Male, age 80, left hemisphere 16.9
1873 Female, age 85, both hemispheres 14.9
2082 Female, age 91, right hemisphere 14.5
2045 Male, age 76, both hemispheres 14.3
2527 Male, age 74, both hemispheres 14.0
Hippocampus, CA2
nTPM: 14.3
1963 Male, age 80, left hemisphere 15.6
2249 Male, age 74, both hemispheres 15.6
1892 Male, age 76, both hemispheres 15.3
2113 Female, age 91, right hemisphere 13.8
1940 Female, age 85, left hemisphere 13.4
2437 Female, age 94, left hemisphere 12.1
Hippocampus, CA3
nTPM: 14.1
2620 Female, age 94, left hemisphere 15.6
1867 Male, age 76, both hemispheres 14.7
2436 Male, age 74, both hemispheres 14.3
2137 Male, age 80, left hemisphere 14.0
1891 Female, age 85, both hemispheres 13.2
2861 Female, age 67, both hemispheres 12.6
Parahippocampal cortex
nTPM: 13.4
2250 Female, age 67, right hemisphere 14.2
1850 Male, age 80, both hemispheres 13.9
1990 Female, age 91, right hemisphere 13.9
1933 Female, age 85, both hemispheres 13.7
2245 Female, age 91, both hemispheres 13.6
2622 Female, age 67, right hemisphere 13.3
2692 Male, age 74, both hemispheres 13.3
2018 Male, age 76, both hemispheres 13.2
2532 Female, age 72, left hemisphere 13.1
2693 Female, age 94, both hemispheres 12.1
Perirhinal gyrus
nTPM: 13.8
1841 Female, age 85, right hemisphere 14.4
1847 Female, age 91, left hemisphere 14.4
1794 Male, age 80, right hemisphere 13.6
2848 Male, age 76, right hemisphere 13.3
2521 Female, age 94, right hemisphere 13.2
Subiculum
nTPM: 13.2
1977 Female, age 85, both hemispheres 14.1
1901 Male, age 80, both hemispheres 13.8
2729 Female, age 91, right hemisphere 13.6
2619 Male, age 74, both hemispheres 13.4
2042 Male, age 76, both hemispheres 12.2
2438 Female, age 94, left hemisphere 11.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.8
Samples: 197

Max nTPM: 25.2
Min nTPM: 3.3
Std nTPM: 4.2
Median nTPM: 10.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 25.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 23.1
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 22.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 21.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 20.4
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 20.3
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 19.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 19.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 19.4
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 19.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 18.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.7
FF:10153-102I9 76 years, female 18.9
FF:10169-103B7 60 years, female 10.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.0
Samples: 4

Max nTPM: 31.3
Min nTPM: 18.7
Sample A Female 31.3
Sample B Female 21.3
Sample C Male 20.8
Sample D Male 18.7
Entorhinal cortex
nTPM: 19.9
Samples: 4

Max nTPM: 23.1
Min nTPM: 15.8
Sample A Female 20.5
Sample B Female 23.1
Sample C Male 20.2
Sample D Male 15.8
Subiculum
nTPM: 18.1
Samples: 4

Max nTPM: 24.2
Min nTPM: 15.1
Sample A Female 24.2
Sample B Female 15.1
Sample C Male 17.3
Sample D Male 15.9
Ventral hippocampus
nTPM: 20.7
Samples: 4

Max nTPM: 23.2
Min nTPM: 14.8
Sample A Female 22.6
Sample B Female 14.8
Sample C Male 23.2
Sample D Male 22.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 84.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 78.3
Samples: 4

Max nTPM: 86.4
Min nTPM: 70.7
Sample A Male 70.7
Sample B Male 76.4
Sample C Female 86.4
Sample D Female 79.7
Hippocampal formation
nTPM: 84.4
Samples: 4

Max nTPM: 87.7
Min nTPM: 78.0
Sample A Male 87.3
Sample B Male 78.0
Sample C Female 87.7
Sample D Female 84.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.2
69102926 Antisense, RP_050316_01_H07, Mouse strain C57BL/6J (56 days, male) 3.2

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