ABOUTMENU
HELP
NEWS
FLOT2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:41.1 nTPM
HPA:41.1 nTPM
GTEx:40.8 nTPM
FANTOM5:27.2 Scaled Tags Per Million
Pig:49.5 nTPM
Mouse:63.9 nTPM
Allen mouse:9.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001396Antibody CAB004395
Glial cells MediumHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.1
Sample id Sample description nTPM
Hippocampus
nTPM: 35.6
1898 Male, age 80, left hemisphere 39.8
2621 Female, age 67, right hemisphere 38.1
2529 Female, age 94, left hemisphere 36.2
2148 Female, age 91, left hemisphere 34.9
1855 Male, age 76, left hemisphere 34.4
1911 Female, age 85, right hemisphere 30.0
Dentate gyrus
nTPM: 35.0
2530 Female, age 94, left hemisphere 38.4
2246 Female, age 85, both hemispheres 36.4
2528 Male, age 74, both hemispheres 34.6
2531 Female, age 67, both hemispheres 34.6
1927 Female, age 91, both hemispheres 34.0
2010 Male, age 76, both hemispheres 31.8
Entorhinal gyrus
nTPM: 41.1
1938 Female, age 85, left hemisphere 46.0
2613 Female, age 94, left hemisphere 44.0
2764 Male, age 80, right hemisphere 41.0
1787 Male, age 76, left hemisphere 40.7
2686 Male, age 75, right hemisphere 40.3
2117 Female, age 91, right hemisphere 34.7
Hippocampus, CA1
nTPM: 34.9
2749 Male, age 80, left hemisphere 39.1
1873 Female, age 85, both hemispheres 36.7
2527 Male, age 74, both hemispheres 35.4
2082 Female, age 91, right hemisphere 34.0
2045 Male, age 76, both hemispheres 29.4
Hippocampus, CA2
nTPM: 35.5
1963 Male, age 80, left hemisphere 37.6
2249 Male, age 74, both hemispheres 36.6
2437 Female, age 94, left hemisphere 36.4
1940 Female, age 85, left hemisphere 35.4
1892 Male, age 76, both hemispheres 34.0
2113 Female, age 91, right hemisphere 33.2
Hippocampus, CA3
nTPM: 34.2
2436 Male, age 74, both hemispheres 39.6
2861 Female, age 67, both hemispheres 37.9
1867 Male, age 76, both hemispheres 32.2
2620 Female, age 94, left hemisphere 32.2
1891 Female, age 85, both hemispheres 31.8
2137 Male, age 80, left hemisphere 31.2
Parahippocampal cortex
nTPM: 37.1
2250 Female, age 67, right hemisphere 41.3
1850 Male, age 80, both hemispheres 41.0
2622 Female, age 67, right hemisphere 39.9
1933 Female, age 85, both hemispheres 38.3
1990 Female, age 91, right hemisphere 38.2
2692 Male, age 74, both hemispheres 38.1
2693 Female, age 94, both hemispheres 35.5
2245 Female, age 91, both hemispheres 34.6
2532 Female, age 72, left hemisphere 34.2
2018 Male, age 76, both hemispheres 29.8
Perirhinal gyrus
nTPM: 40.3
1847 Female, age 91, left hemisphere 45.1
1841 Female, age 85, right hemisphere 43.1
1794 Male, age 80, right hemisphere 41.5
2521 Female, age 94, right hemisphere 37.0
2848 Male, age 76, right hemisphere 34.9
Subiculum
nTPM: 34.8
1977 Female, age 85, both hemispheres 39.9
2619 Male, age 74, both hemispheres 39.6
2438 Female, age 94, left hemisphere 36.6
2729 Female, age 91, right hemisphere 33.1
1901 Male, age 80, both hemispheres 31.0
2042 Male, age 76, both hemispheres 28.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.8
Samples: 197

Max nTPM: 89.9
Min nTPM: 11.7
Std nTPM: 13.6
Median nTPM: 38.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 89.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 86.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 81.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 76.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 76.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 74.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 72.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 68.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 68.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 67.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 67.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.2
FF:10153-102I9 76 years, female 28.3
FF:10169-103B7 60 years, female 26.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 49.5
Samples: 4

Max nTPM: 66.3
Min nTPM: 35.3
Sample A Female 66.3
Sample B Female 57.2
Sample C Male 35.3
Sample D Male 39.1
Entorhinal cortex
nTPM: 41.1
Samples: 4

Max nTPM: 45.7
Min nTPM: 35.7
Sample A Female 45.6
Sample B Female 35.7
Sample C Male 45.7
Sample D Male 37.2
Subiculum
nTPM: 40.6
Samples: 4

Max nTPM: 49.8
Min nTPM: 36.1
Sample A Female 49.8
Sample B Female 36.1
Sample C Male 40.0
Sample D Male 36.5
Ventral hippocampus
nTPM: 49.0
Samples: 4

Max nTPM: 59.8
Min nTPM: 32.5
Sample A Female 48.7
Sample B Female 32.5
Sample C Male 55.0
Sample D Male 59.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.0
Samples: 4

Max nTPM: 67.9
Min nTPM: 57.7
Sample A Male 62.7
Sample B Male 67.9
Sample C Female 57.7
Sample D Female 67.5
Hippocampal formation
nTPM: 58.9
Samples: 4

Max nTPM: 60.6
Min nTPM: 54.4
Sample A Male 60.3
Sample B Male 60.6
Sample C Female 60.2
Sample D Female 54.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.0
74511805 Antisense, RP_060220_03_B02, Mouse strain C57BL/6J (56 days, male) 9.6
69672486 Antisense, RP_050428_03_H05, Mouse strain C57BL/6J (56 days, male) 8.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.