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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:105.2 nTPM
HPA:105.2 nTPM
GTEx:99.1 nTPM
FANTOM5:755.2 Scaled Tags Per Million
Pig:262.2 nTPM
Mouse:416.2 nTPM
Allen mouse:19.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA064091
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 105.2
Sample id Sample description nTPM
Hippocampus
nTPM: 84.0
1898 Male, age 80, left hemisphere 110.7
2621 Female, age 67, right hemisphere 89.6
1855 Male, age 76, left hemisphere 87.7
2529 Female, age 94, left hemisphere 72.5
1911 Female, age 85, right hemisphere 71.9
2148 Female, age 91, left hemisphere 71.8
Dentate gyrus
nTPM: 81.9
2010 Male, age 76, both hemispheres 93.1
2530 Female, age 94, left hemisphere 93.0
1927 Female, age 91, both hemispheres 87.3
2528 Male, age 74, both hemispheres 80.1
2246 Female, age 85, both hemispheres 79.2
2531 Female, age 67, both hemispheres 58.6
Entorhinal gyrus
nTPM: 93.3
2764 Male, age 80, right hemisphere 105.6
2613 Female, age 94, left hemisphere 103.6
1938 Female, age 85, left hemisphere 101.0
2117 Female, age 91, right hemisphere 96.4
1787 Male, age 76, left hemisphere 89.4
2686 Male, age 75, right hemisphere 63.9
Hippocampus, CA1
nTPM: 97.1
2749 Male, age 80, left hemisphere 163.6
1873 Female, age 85, both hemispheres 92.1
2527 Male, age 74, both hemispheres 90.1
2045 Male, age 76, both hemispheres 73.4
2082 Female, age 91, right hemisphere 66.5
Hippocampus, CA2
nTPM: 86.4
1963 Male, age 80, left hemisphere 106.3
1892 Male, age 76, both hemispheres 104.4
2249 Male, age 74, both hemispheres 83.8
1940 Female, age 85, left hemisphere 79.4
2437 Female, age 94, left hemisphere 73.1
2113 Female, age 91, right hemisphere 71.3
Hippocampus, CA3
nTPM: 87.5
2137 Male, age 80, left hemisphere 133.0
1867 Male, age 76, both hemispheres 93.4
2620 Female, age 94, left hemisphere 81.6
1891 Female, age 85, both hemispheres 81.0
2861 Female, age 67, both hemispheres 70.6
2436 Male, age 74, both hemispheres 65.4
Parahippocampal cortex
nTPM: 88.0
1850 Male, age 80, both hemispheres 116.3
1933 Female, age 85, both hemispheres 92.6
1990 Female, age 91, right hemisphere 92.6
2532 Female, age 72, left hemisphere 89.0
2250 Female, age 67, right hemisphere 88.6
2692 Male, age 74, both hemispheres 85.9
2693 Female, age 94, both hemispheres 84.2
2245 Female, age 91, both hemispheres 81.4
2018 Male, age 76, both hemispheres 80.7
2622 Female, age 67, right hemisphere 68.8
Perirhinal gyrus
nTPM: 105.2
1794 Male, age 80, right hemisphere 115.1
1847 Female, age 91, left hemisphere 111.4
2521 Female, age 94, right hemisphere 106.1
1841 Female, age 85, right hemisphere 104.9
2848 Male, age 76, right hemisphere 88.7
Subiculum
nTPM: 87.5
1901 Male, age 80, both hemispheres 109.6
1977 Female, age 85, both hemispheres 98.5
2042 Male, age 76, both hemispheres 92.5
2619 Male, age 74, both hemispheres 78.7
2438 Female, age 94, left hemisphere 77.5
2729 Female, age 91, right hemisphere 68.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 99.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 99.1
Samples: 197

Max nTPM: 187.7
Min nTPM: 30.6
Std nTPM: 26.4
Median nTPM: 97.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 187.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 172.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 149.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 149.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 149.4
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 147.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 147.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 145.9
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 145.1
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 143.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 142.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 755.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 755.2
FF:10169-103B7 60 years, female 936.4
FF:10153-102I9 76 years, female 574.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 262.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 262.2
Samples: 4

Max nTPM: 336.6
Min nTPM: 164.2
Sample A Female 336.6
Sample B Female 255.7
Sample C Male 292.1
Sample D Male 164.2
Entorhinal cortex
nTPM: 220.0
Samples: 4

Max nTPM: 233.1
Min nTPM: 203.8
Sample A Female 229.5
Sample B Female 203.8
Sample C Male 233.1
Sample D Male 213.6
Subiculum
nTPM: 240.2
Samples: 4

Max nTPM: 309.5
Min nTPM: 194.5
Sample A Female 309.5
Sample B Female 222.9
Sample C Male 234.0
Sample D Male 194.5
Ventral hippocampus
nTPM: 237.9
Samples: 4

Max nTPM: 262.6
Min nTPM: 173.5
Sample A Female 255.2
Sample B Female 173.5
Sample C Male 260.2
Sample D Male 262.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 416.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 402.2
Samples: 4

Max nTPM: 449.9
Min nTPM: 373.1
Sample A Male 398.9
Sample B Male 386.7
Sample C Female 373.1
Sample D Female 449.9
Hippocampal formation
nTPM: 416.3
Samples: 4

Max nTPM: 496.3
Min nTPM: 366.5
Sample A Male 366.5
Sample B Male 424.5
Sample C Female 496.3
Sample D Female 377.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.8
2649 Antisense, RP_Baylor_103378, Mouse strain C57BL/6J (56 days, male) 19.8
2650 Antisense, RP_Baylor_103378, Mouse strain C57BL/6J (56 days, male) 16.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.