ABOUTMENU
HELP
NEWS
POMP
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:78.1 nTPM
HPA:78.1 nTPM
GTEx:86.0 nTPM
FANTOM5:119.5 Scaled Tags Per Million
Pig:48.6 nTPM
Mouse:249.3 nTPM
Allen mouse:7.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026995
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 78.1
Sample id Sample description nTPM
Hippocampus
nTPM: 76.4
1898 Male, age 80, left hemisphere 81.3
1911 Female, age 85, right hemisphere 76.8
2529 Female, age 94, left hemisphere 76.7
2621 Female, age 67, right hemisphere 76.2
1855 Male, age 76, left hemisphere 76.1
2148 Female, age 91, left hemisphere 71.3
Dentate gyrus
nTPM: 76.5
2010 Male, age 76, both hemispheres 81.0
2530 Female, age 94, left hemisphere 78.5
1927 Female, age 91, both hemispheres 77.9
2528 Male, age 74, both hemispheres 75.4
2246 Female, age 85, both hemispheres 75.2
2531 Female, age 67, both hemispheres 70.8
Entorhinal gyrus
nTPM: 74.1
1938 Female, age 85, left hemisphere 78.5
1787 Male, age 76, left hemisphere 75.6
2117 Female, age 91, right hemisphere 74.6
2764 Male, age 80, right hemisphere 74.0
2613 Female, age 94, left hemisphere 70.9
2686 Male, age 75, right hemisphere 70.8
Hippocampus, CA1
nTPM: 78.0
2749 Male, age 80, left hemisphere 82.8
2527 Male, age 74, both hemispheres 78.4
2045 Male, age 76, both hemispheres 78.2
1873 Female, age 85, both hemispheres 77.6
2082 Female, age 91, right hemisphere 73.1
Hippocampus, CA2
nTPM: 78.1
1892 Male, age 76, both hemispheres 81.6
1963 Male, age 80, left hemisphere 81.2
2249 Male, age 74, both hemispheres 81.2
1940 Female, age 85, left hemisphere 75.7
2437 Female, age 94, left hemisphere 75.5
2113 Female, age 91, right hemisphere 73.5
Hippocampus, CA3
nTPM: 76.2
1867 Male, age 76, both hemispheres 81.2
2137 Male, age 80, left hemisphere 78.7
2436 Male, age 74, both hemispheres 77.2
1891 Female, age 85, both hemispheres 76.9
2620 Female, age 94, left hemisphere 71.6
2861 Female, age 67, both hemispheres 71.4
Parahippocampal cortex
nTPM: 75.4
2018 Male, age 76, both hemispheres 81.6
1850 Male, age 80, both hemispheres 79.1
1933 Female, age 85, both hemispheres 76.5
2250 Female, age 67, right hemisphere 76.5
1990 Female, age 91, right hemisphere 76.2
2245 Female, age 91, both hemispheres 74.2
2532 Female, age 72, left hemisphere 73.6
2693 Female, age 94, both hemispheres 73.4
2692 Male, age 74, both hemispheres 71.9
2622 Female, age 67, right hemisphere 70.8
Perirhinal gyrus
nTPM: 78.0
1841 Female, age 85, right hemisphere 81.0
1847 Female, age 91, left hemisphere 79.1
1794 Male, age 80, right hemisphere 78.9
2521 Female, age 94, right hemisphere 77.2
2848 Male, age 76, right hemisphere 73.9
Subiculum
nTPM: 76.3
1901 Male, age 80, both hemispheres 79.6
2042 Male, age 76, both hemispheres 78.2
1977 Female, age 85, both hemispheres 77.0
2619 Male, age 74, both hemispheres 75.4
2729 Female, age 91, right hemisphere 75.1
2438 Female, age 94, left hemisphere 72.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 86.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 86.0
Samples: 197

Max nTPM: 238.6
Min nTPM: 56.0
Std nTPM: 19.8
Median nTPM: 82.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 238.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 137.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 136.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 131.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 127.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 123.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 123.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 123.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 123.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 122.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 117.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 119.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 119.5
FF:10169-103B7 60 years, female 144.3
FF:10153-102I9 76 years, female 94.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 48.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 48.6
Samples: 4

Max nTPM: 59.6
Min nTPM: 31.6
Sample A Female 59.6
Sample B Female 48.3
Sample C Male 54.8
Sample D Male 31.6
Entorhinal cortex
nTPM: 46.9
Samples: 4

Max nTPM: 62.4
Min nTPM: 31.2
Sample A Female 40.7
Sample B Female 62.4
Sample C Male 53.1
Sample D Male 31.2
Subiculum
nTPM: 42.9
Samples: 4

Max nTPM: 55.1
Min nTPM: 34.6
Sample A Female 55.1
Sample B Female 43.5
Sample C Male 38.5
Sample D Male 34.6
Ventral hippocampus
nTPM: 41.4
Samples: 4

Max nTPM: 49.4
Min nTPM: 34.6
Sample A Female 49.4
Sample B Female 40.1
Sample C Male 41.6
Sample D Male 34.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 249.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 249.3
Samples: 4

Max nTPM: 276.1
Min nTPM: 226.7
Sample A Male 226.7
Sample B Male 264.0
Sample C Female 276.1
Sample D Female 230.3
Hippocampal formation
nTPM: 245.6
Samples: 4

Max nTPM: 299.8
Min nTPM: 190.4
Sample A Male 299.8
Sample B Male 239.9
Sample C Female 252.3
Sample D Female 190.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.1
75774685 Antisense, RP_060530_01_D10, Mouse strain C57BL/6J (56 days, male) 8.6
68196923 Antisense, RP_041116_01_E11, Mouse strain C57BL/6J (56 days, male) 5.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.