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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:48.9 nTPM
HPA:48.9 nTPM
GTEx:46.6 nTPM
FANTOM5:185.9 Scaled Tags Per Million
Pig:45.4 nTPM
Mouse:64.4 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA066228Antibody CAB037086
Glial cells MediumNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.9
Sample id Sample description nTPM
Hippocampus
nTPM: 48.9
2529 Female, age 94, left hemisphere 63.2
2148 Female, age 91, left hemisphere 60.2
2621 Female, age 67, right hemisphere 46.3
1898 Male, age 80, left hemisphere 43.4
1911 Female, age 85, right hemisphere 43.1
1855 Male, age 76, left hemisphere 37.2
Dentate gyrus
nTPM: 38.1
2246 Female, age 85, both hemispheres 43.4
2530 Female, age 94, left hemisphere 41.5
2528 Male, age 74, both hemispheres 40.0
1927 Female, age 91, both hemispheres 38.2
2531 Female, age 67, both hemispheres 33.1
2010 Male, age 76, both hemispheres 32.4
Entorhinal gyrus
nTPM: 46.4
1938 Female, age 85, left hemisphere 53.7
2117 Female, age 91, right hemisphere 49.5
2686 Male, age 75, right hemisphere 48.8
1787 Male, age 76, left hemisphere 47.4
2764 Male, age 80, right hemisphere 42.7
2613 Female, age 94, left hemisphere 36.2
Hippocampus, CA1
nTPM: 38.8
2527 Male, age 74, both hemispheres 54.0
1873 Female, age 85, both hemispheres 44.4
2749 Male, age 80, left hemisphere 36.2
2045 Male, age 76, both hemispheres 31.9
2082 Female, age 91, right hemisphere 27.5
Hippocampus, CA2
nTPM: 37.0
1892 Male, age 76, both hemispheres 44.9
2113 Female, age 91, right hemisphere 43.8
2437 Female, age 94, left hemisphere 42.5
1963 Male, age 80, left hemisphere 35.2
2249 Male, age 74, both hemispheres 29.1
1940 Female, age 85, left hemisphere 26.8
Hippocampus, CA3
nTPM: 41.2
2861 Female, age 67, both hemispheres 55.1
2620 Female, age 94, left hemisphere 47.9
1867 Male, age 76, both hemispheres 44.8
1891 Female, age 85, both hemispheres 40.9
2137 Male, age 80, left hemisphere 32.6
2436 Male, age 74, both hemispheres 25.8
Parahippocampal cortex
nTPM: 44.2
2692 Male, age 74, both hemispheres 66.5
2622 Female, age 67, right hemisphere 55.0
2245 Female, age 91, both hemispheres 49.4
1850 Male, age 80, both hemispheres 44.6
1933 Female, age 85, both hemispheres 42.2
1990 Female, age 91, right hemisphere 42.2
2532 Female, age 72, left hemisphere 41.8
2018 Male, age 76, both hemispheres 39.1
2250 Female, age 67, right hemisphere 36.0
2693 Female, age 94, both hemispheres 24.9
Perirhinal gyrus
nTPM: 41.1
1847 Female, age 91, left hemisphere 53.3
1794 Male, age 80, right hemisphere 45.0
1841 Female, age 85, right hemisphere 42.6
2848 Male, age 76, right hemisphere 41.2
2521 Female, age 94, right hemisphere 23.5
Subiculum
nTPM: 46.1
2438 Female, age 94, left hemisphere 64.9
2619 Male, age 74, both hemispheres 60.0
2729 Female, age 91, right hemisphere 49.6
1977 Female, age 85, both hemispheres 39.8
1901 Male, age 80, both hemispheres 35.3
2042 Male, age 76, both hemispheres 26.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.6
Samples: 197

Max nTPM: 97.7
Min nTPM: 11.4
Std nTPM: 14.7
Median nTPM: 44.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 97.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 93.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 87.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 83.8
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 79.6
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 79.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 77.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 76.6
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 75.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 75.8
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 75.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 185.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 185.9
FF:10169-103B7 60 years, female 205.0
FF:10153-102I9 76 years, female 166.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 34.6
Samples: 4

Max nTPM: 41.4
Min nTPM: 30.3
Sample A Female 32.2
Sample B Female 34.6
Sample C Male 41.4
Sample D Male 30.3
Entorhinal cortex
nTPM: 45.4
Samples: 4

Max nTPM: 54.8
Min nTPM: 38.9
Sample A Female 38.9
Sample B Female 48.3
Sample C Male 54.8
Sample D Male 39.7
Subiculum
nTPM: 40.8
Samples: 4

Max nTPM: 56.8
Min nTPM: 29.3
Sample A Female 56.8
Sample B Female 40.2
Sample C Male 36.9
Sample D Male 29.3
Ventral hippocampus
nTPM: 35.7
Samples: 4

Max nTPM: 47.4
Min nTPM: 24.8
Sample A Female 24.8
Sample B Female 37.6
Sample C Male 47.4
Sample D Male 32.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 64.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.4
Samples: 4

Max nTPM: 67.9
Min nTPM: 59.5
Sample A Male 66.3
Sample B Male 59.5
Sample C Female 67.9
Sample D Female 64.0
Hippocampal formation
nTPM: 58.1
Samples: 4

Max nTPM: 66.0
Min nTPM: 50.3
Sample A Male 60.7
Sample B Male 55.2
Sample C Female 50.3
Sample D Female 66.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
74058647 Antisense, RP_051019_03_F09, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

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