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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:13.0 nTPM
HPA:13.0 nTPM
GTEx:24.1 nTPM
FANTOM5:21.9 Scaled Tags Per Million
Pig:26.0 nTPM
Mouse:6.6 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042375
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.0
Sample id Sample description nTPM
Hippocampus
nTPM: 12.9
1898 Male, age 80, left hemisphere 14.5
1855 Male, age 76, left hemisphere 13.9
2529 Female, age 94, left hemisphere 12.9
2148 Female, age 91, left hemisphere 12.1
2621 Female, age 67, right hemisphere 12.1
1911 Female, age 85, right hemisphere 11.8
Dentate gyrus
nTPM: 12.9
2530 Female, age 94, left hemisphere 14.2
2528 Male, age 74, both hemispheres 13.9
2246 Female, age 85, both hemispheres 13.3
2010 Male, age 76, both hemispheres 13.0
1927 Female, age 91, both hemispheres 12.8
2531 Female, age 67, both hemispheres 10.0
Entorhinal gyrus
nTPM: 12.1
2117 Female, age 91, right hemisphere 13.2
2764 Male, age 80, right hemisphere 12.9
1787 Male, age 76, left hemisphere 12.2
1938 Female, age 85, left hemisphere 11.9
2613 Female, age 94, left hemisphere 11.7
2686 Male, age 75, right hemisphere 10.6
Hippocampus, CA1
nTPM: 13.0
2749 Male, age 80, left hemisphere 15.8
2527 Male, age 74, both hemispheres 13.7
1873 Female, age 85, both hemispheres 12.2
2045 Male, age 76, both hemispheres 11.8
2082 Female, age 91, right hemisphere 11.7
Hippocampus, CA2
nTPM: 13.0
1963 Male, age 80, left hemisphere 14.6
2249 Male, age 74, both hemispheres 13.9
1892 Male, age 76, both hemispheres 13.6
2437 Female, age 94, left hemisphere 13.4
2113 Female, age 91, right hemisphere 11.7
1940 Female, age 85, left hemisphere 10.8
Hippocampus, CA3
nTPM: 12.5
2436 Male, age 74, both hemispheres 14.1
2137 Male, age 80, left hemisphere 13.3
1867 Male, age 76, both hemispheres 13.2
2620 Female, age 94, left hemisphere 12.7
1891 Female, age 85, both hemispheres 11.4
2861 Female, age 67, both hemispheres 10.1
Parahippocampal cortex
nTPM: 11.6
2250 Female, age 67, right hemisphere 13.2
2245 Female, age 91, both hemispheres 12.6
1990 Female, age 91, right hemisphere 12.0
1933 Female, age 85, both hemispheres 11.8
2692 Male, age 74, both hemispheres 11.6
1850 Male, age 80, both hemispheres 11.5
2622 Female, age 67, right hemisphere 11.0
2693 Female, age 94, both hemispheres 11.0
2018 Male, age 76, both hemispheres 10.9
2532 Female, age 72, left hemisphere 10.8
Perirhinal gyrus
nTPM: 11.9
1794 Male, age 80, right hemisphere 12.5
1847 Female, age 91, left hemisphere 12.2
2521 Female, age 94, right hemisphere 12.0
1841 Female, age 85, right hemisphere 11.4
2848 Male, age 76, right hemisphere 11.1
Subiculum
nTPM: 12.3
1977 Female, age 85, both hemispheres 12.8
2438 Female, age 94, left hemisphere 12.8
2619 Male, age 74, both hemispheres 12.6
1901 Male, age 80, both hemispheres 12.2
2042 Male, age 76, both hemispheres 11.7
2729 Female, age 91, right hemisphere 11.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.1
Samples: 197

Max nTPM: 38.9
Min nTPM: 10.3
Std nTPM: 5.1
Median nTPM: 24.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 38.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 38.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 34.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 34.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 34.4
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 33.6
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 33.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 33.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 32.6
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 32.4
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 32.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.9
FF:10169-103B7 60 years, female 27.2
FF:10153-102I9 76 years, female 16.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.4
Samples: 4

Max nTPM: 25.3
Min nTPM: 20.3
Sample A Female 25.3
Sample B Female 20.3
Sample C Male 23.7
Sample D Male 20.4
Entorhinal cortex
nTPM: 26.0
Samples: 4

Max nTPM: 32.5
Min nTPM: 20.2
Sample A Female 20.2
Sample B Female 28.4
Sample C Male 32.5
Sample D Male 22.9
Subiculum
nTPM: 22.3
Samples: 4

Max nTPM: 29.6
Min nTPM: 18.5
Sample A Female 29.6
Sample B Female 18.8
Sample C Male 22.1
Sample D Male 18.5
Ventral hippocampus
nTPM: 23.0
Samples: 4

Max nTPM: 31.9
Min nTPM: 18.3
Sample A Female 20.8
Sample B Female 18.3
Sample C Male 31.9
Sample D Male 21.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.6
Samples: 4

Max nTPM: 7.1
Min nTPM: 6.2
Sample A Male 6.2
Sample B Male 6.4
Sample C Female 6.7
Sample D Female 7.1
Hippocampal formation
nTPM: 6.4
Samples: 4

Max nTPM: 9.1
Min nTPM: 4.3
Sample A Male 9.1
Sample B Male 4.3
Sample C Female 6.5
Sample D Female 5.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
79756283 Antisense, RP_071204_02_E02, Mouse strain C57BL/6J (56 days, male) 0.2

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