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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:36.9 nTPM
HPA:36.9 nTPM
GTEx:32.9 nTPM
FANTOM5:121.0 Scaled Tags Per Million
Pig:15.2 nTPM
Mouse:13.7 nTPM
Allen mouse:0.2 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 36.9
Sample id Sample description nTPM
Amygdala
nTPM: 36.9
2514 Male, age 75, right hemisphere 38.7
2814 Male, age 76, right hemisphere 38.6
2695 Female, age 67, right hemisphere 37.2
1987 Female, age 91, left hemisphere 35.8
2517 Female, age 94, left hemisphere 34.4
Basal amygdala
nTPM: 33.7
2110 Male, age 80, left hemisphere 36.4
2609 Male, age 75, right hemisphere 34.1
1955 Male, age 76, both hemispheres 33.9
2243 Female, age 91, right hemisphere 33.0
2685 Female, age 94, left hemisphere 32.5
2827 Female, age 67, right hemisphere 32.2
Central amygdala
nTPM: 35.0
2515 Male, age 75, right hemisphere 37.5
1905 Male, age 76, both hemispheres 37.4
2239 Male, age 80, left hemisphere 34.3
2701 Female, age 91, right hemisphere 33.2
2826 Female, age 94, left hemisphere 32.4
Corticomedial amygdala
nTPM: 34.3
2428 Male, age 75, right hemisphere 36.6
2829 Male, age 80, left hemisphere 36.6
2242 Female, age 91, right hemisphere 34.6
2429 Female, age 94, left hemisphere 34.4
2240 Male, age 76, both hemispheres 32.6
2535 Female, age 67, right hemisphere 31.2
Lateral amygdala
nTPM: 34.3
2516 Male, age 75, right hemisphere 38.1
1883 Male, age 76, both hemispheres 36.5
2830 Female, age 67, right hemisphere 34.6
2256 Male, age 80, left hemisphere 33.3
2534 Female, age 94, left hemisphere 32.8
2255 Female, age 91, right hemisphere 30.7
Stria terminalis, bed nucleus
nTPM: 32.8
2486 Female, age 94, both hemispheres 33.4
1974 Female, age 91, both hemispheres 32.6
2201 Male, age 74, unknown 32.5

AMYGDALA - GTEx RNA-seqi
Average nTPM 32.9
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 32.9
Samples: 152

Max nTPM: 54.2
Min nTPM: 21.1
Std nTPM: 6.8
Median nTPM: 32.1
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 54.2
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 52.7
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 52.6
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 52.5
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 51.0
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 48.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 47.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 46.6
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 46.5
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 45.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 45.4
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 121.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 121.0
FF:10151-102I7 76 years, female 121.0

AMYGDALA - Pig RNA-seqi
Average nTPM 15.2
Pig sample Sample description nTPM
Amygdala
nTPM: 15.2
Samples: 4

Max nTPM: 19.7
Min nTPM: 13.4
Sample A Female 13.4
Sample B Female 19.7
Sample C Male 13.8
Sample D Male 13.9

AMYGDALA - Mouse RNA-seqi
Average nTPM 13.7
Mouse sample Sample description nTPM
Amygdala
nTPM: 13.7
Samples: 4

Max nTPM: 15.2
Min nTPM: 12.8
Sample A Male 13.0
Sample B Male 13.8
Sample C Female 15.2
Sample D Female 12.8

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.2
68193030 Antisense, RP_040825_01_G03, Mouse strain C57BL/6J (56 days, male) 0.3
70919376 Antisense, RP_050713_01_B12, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.