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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:19.1 nTPM
HPA:19.1 nTPM
GTEx:11.5 nTPM
FANTOM5:19.9 Scaled Tags Per Million
Pig:17.2 nTPM
Mouse:19.8 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018439Antibody HPA023765
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.1
Sample id Sample description nTPM
Hippocampus
nTPM: 17.3
1911 Female, age 85, right hemisphere 20.9
2148 Female, age 91, left hemisphere 17.2
2529 Female, age 94, left hemisphere 16.9
2621 Female, age 67, right hemisphere 16.5
1855 Male, age 76, left hemisphere 16.1
1898 Male, age 80, left hemisphere 15.8
Dentate gyrus
nTPM: 17.5
1927 Female, age 91, both hemispheres 19.1
2010 Male, age 76, both hemispheres 18.5
2531 Female, age 67, both hemispheres 17.9
2246 Female, age 85, both hemispheres 17.0
2530 Female, age 94, left hemisphere 16.9
2528 Male, age 74, both hemispheres 15.7
Entorhinal gyrus
nTPM: 17.9
1938 Female, age 85, left hemisphere 20.2
2117 Female, age 91, right hemisphere 18.7
2613 Female, age 94, left hemisphere 18.4
2686 Male, age 75, right hemisphere 18.2
2764 Male, age 80, right hemisphere 16.8
1787 Male, age 76, left hemisphere 14.9
Hippocampus, CA1
nTPM: 17.9
2045 Male, age 76, both hemispheres 19.3
1873 Female, age 85, both hemispheres 18.5
2527 Male, age 74, both hemispheres 18.4
2749 Male, age 80, left hemisphere 17.7
2082 Female, age 91, right hemisphere 15.5
Hippocampus, CA2
nTPM: 16.8
1963 Male, age 80, left hemisphere 19.1
2113 Female, age 91, right hemisphere 17.9
1892 Male, age 76, both hemispheres 17.5
2437 Female, age 94, left hemisphere 16.7
1940 Female, age 85, left hemisphere 15.8
2249 Male, age 74, both hemispheres 13.9
Hippocampus, CA3
nTPM: 17.4
2137 Male, age 80, left hemisphere 21.0
1891 Female, age 85, both hemispheres 20.9
1867 Male, age 76, both hemispheres 18.3
2861 Female, age 67, both hemispheres 16.4
2436 Male, age 74, both hemispheres 14.8
2620 Female, age 94, left hemisphere 13.2
Parahippocampal cortex
nTPM: 17.8
1933 Female, age 85, both hemispheres 20.7
1850 Male, age 80, both hemispheres 20.6
2693 Female, age 94, both hemispheres 18.5
2018 Male, age 76, both hemispheres 18.4
2532 Female, age 72, left hemisphere 18.1
2692 Male, age 74, both hemispheres 17.4
2622 Female, age 67, right hemisphere 17.3
1990 Female, age 91, right hemisphere 16.3
2245 Female, age 91, both hemispheres 15.3
2250 Female, age 67, right hemisphere 15.3
Perirhinal gyrus
nTPM: 19.1
1794 Male, age 80, right hemisphere 22.3
2848 Male, age 76, right hemisphere 21.9
1847 Female, age 91, left hemisphere 17.4
2521 Female, age 94, right hemisphere 17.0
1841 Female, age 85, right hemisphere 16.8
Subiculum
nTPM: 17.7
2042 Male, age 76, both hemispheres 21.0
2729 Female, age 91, right hemisphere 18.2
2438 Female, age 94, left hemisphere 18.0
1901 Male, age 80, both hemispheres 16.9
2619 Male, age 74, both hemispheres 16.1
1977 Female, age 85, both hemispheres 15.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.5
Samples: 197

Max nTPM: 17.1
Min nTPM: 7.3
Std nTPM: 1.8
Median nTPM: 11.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 17.1
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 16.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 16.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 15.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 15.6
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 15.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 15.4
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 15.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 15.2
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 15.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 15.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.9
FF:10153-102I9 76 years, female 24.2
FF:10169-103B7 60 years, female 15.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.2
Samples: 4

Max nTPM: 18.1
Min nTPM: 16.4
Sample A Female 18.1
Sample B Female 17.4
Sample C Male 16.4
Sample D Male 16.8
Entorhinal cortex
nTPM: 15.8
Samples: 4

Max nTPM: 17.9
Min nTPM: 13.9
Sample A Female 15.6
Sample B Female 17.9
Sample C Male 15.7
Sample D Male 13.9
Subiculum
nTPM: 15.5
Samples: 4

Max nTPM: 19.1
Min nTPM: 14.2
Sample A Female 19.1
Sample B Female 14.2
Sample C Male 14.2
Sample D Male 14.5
Ventral hippocampus
nTPM: 15.7
Samples: 4

Max nTPM: 16.8
Min nTPM: 13.9
Sample A Female 16.7
Sample B Female 15.4
Sample C Male 13.9
Sample D Male 16.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.0
Samples: 4

Max nTPM: 20.6
Min nTPM: 17.4
Sample A Male 18.6
Sample B Male 17.4
Sample C Female 19.5
Sample D Female 20.6
Hippocampal formation
nTPM: 19.8
Samples: 4

Max nTPM: 21.1
Min nTPM: 18.7
Sample A Male 18.7
Sample B Male 21.1
Sample C Female 20.6
Sample D Female 18.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
69735508 Antisense, RP_050503_02_H12, Mouse strain C57BL/6J (56 days, male) 0.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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