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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:40.4 nTPM
HPA:40.4 nTPM
GTEx:33.7 nTPM
FANTOM5:116.9 Scaled Tags Per Million
Pig:41.4 nTPM
Mouse:19.4 nTPM
Allen mouse:11.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036424Antibody HPA040881
Glial cells Not detectedNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.4
Sample id Sample description nTPM
Hippocampus
nTPM: 40.0
1898 Male, age 80, left hemisphere 44.4
2621 Female, age 67, right hemisphere 41.7
1855 Male, age 76, left hemisphere 40.6
2529 Female, age 94, left hemisphere 39.0
1911 Female, age 85, right hemisphere 38.1
2148 Female, age 91, left hemisphere 36.2
Dentate gyrus
nTPM: 38.2
2010 Male, age 76, both hemispheres 41.9
1927 Female, age 91, both hemispheres 40.1
2528 Male, age 74, both hemispheres 38.1
2246 Female, age 85, both hemispheres 37.3
2530 Female, age 94, left hemisphere 36.3
2531 Female, age 67, both hemispheres 35.7
Entorhinal gyrus
nTPM: 38.2
2117 Female, age 91, right hemisphere 39.1
2686 Male, age 75, right hemisphere 39.1
1787 Male, age 76, left hemisphere 38.9
1938 Female, age 85, left hemisphere 38.8
2764 Male, age 80, right hemisphere 38.3
2613 Female, age 94, left hemisphere 35.1
Hippocampus, CA1
nTPM: 40.4
2749 Male, age 80, left hemisphere 46.9
1873 Female, age 85, both hemispheres 41.8
2045 Male, age 76, both hemispheres 38.4
2527 Male, age 74, both hemispheres 38.1
2082 Female, age 91, right hemisphere 36.7
Hippocampus, CA2
nTPM: 39.7
1963 Male, age 80, left hemisphere 44.1
1892 Male, age 76, both hemispheres 43.8
2249 Male, age 74, both hemispheres 39.9
1940 Female, age 85, left hemisphere 39.0
2437 Female, age 94, left hemisphere 36.0
2113 Female, age 91, right hemisphere 35.6
Hippocampus, CA3
nTPM: 39.0
1867 Male, age 76, both hemispheres 41.7
2137 Male, age 80, left hemisphere 41.5
1891 Female, age 85, both hemispheres 39.1
2436 Male, age 74, both hemispheres 38.9
2861 Female, age 67, both hemispheres 36.5
2620 Female, age 94, left hemisphere 36.1
Parahippocampal cortex
nTPM: 37.8
1850 Male, age 80, both hemispheres 41.9
1933 Female, age 85, both hemispheres 38.6
2622 Female, age 67, right hemisphere 37.9
2693 Female, age 94, both hemispheres 37.8
2532 Female, age 72, left hemisphere 37.6
1990 Female, age 91, right hemisphere 37.5
2018 Male, age 76, both hemispheres 36.8
2250 Female, age 67, right hemisphere 36.8
2245 Female, age 91, both hemispheres 36.7
2692 Male, age 74, both hemispheres 36.4
Perirhinal gyrus
nTPM: 39.6
1847 Female, age 91, left hemisphere 41.4
1841 Female, age 85, right hemisphere 40.5
1794 Male, age 80, right hemisphere 40.4
2848 Male, age 76, right hemisphere 38.7
2521 Female, age 94, right hemisphere 36.9
Subiculum
nTPM: 39.2
1901 Male, age 80, both hemispheres 42.3
1977 Female, age 85, both hemispheres 40.0
2729 Female, age 91, right hemisphere 39.3
2042 Male, age 76, both hemispheres 38.4
2619 Male, age 74, both hemispheres 37.6
2438 Female, age 94, left hemisphere 37.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.7
Samples: 197

Max nTPM: 46.4
Min nTPM: 24.1
Std nTPM: 3.9
Median nTPM: 33.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 46.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 43.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 43.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 43.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 42.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 42.2
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 40.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 40.7
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 40.5
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 40.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 40.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 116.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 116.9
FF:10169-103B7 60 years, female 127.6
FF:10153-102I9 76 years, female 106.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 41.5
Samples: 4

Max nTPM: 49.9
Min nTPM: 34.7
Sample A Female 49.9
Sample B Female 40.6
Sample C Male 40.7
Sample D Male 34.7
Entorhinal cortex
nTPM: 38.0
Samples: 4

Max nTPM: 45.3
Min nTPM: 33.5
Sample A Female 45.3
Sample B Female 37.4
Sample C Male 35.6
Sample D Male 33.5
Subiculum
nTPM: 37.4
Samples: 4

Max nTPM: 46.7
Min nTPM: 33.5
Sample A Female 46.7
Sample B Female 33.5
Sample C Male 34.2
Sample D Male 35.0
Ventral hippocampus
nTPM: 39.7
Samples: 4

Max nTPM: 50.0
Min nTPM: 30.6
Sample A Female 50.0
Sample B Female 30.6
Sample C Male 36.4
Sample D Male 41.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.4
Samples: 4

Max nTPM: 20.8
Min nTPM: 18.1
Sample A Male 19.2
Sample B Male 20.8
Sample C Female 18.1
Sample D Female 19.6
Hippocampal formation
nTPM: 18.0
Samples: 4

Max nTPM: 18.8
Min nTPM: 17.1
Sample A Male 18.8
Sample B Male 18.7
Sample C Female 17.1
Sample D Female 17.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.1
68443184 Antisense, RP_050111_01_E06, Mouse strain C57BL/6J (56 days, male) 11.1

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The Human Protein Atlas

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