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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:234.6 nTPM
HPA:234.6 nTPM
GTEx:170.3 nTPM
FANTOM5:616.1 Scaled Tags Per Million
Pig:85.9 nTPM
Mouse:261.9 nTPM
Allen mouse:17.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 234.6
Sample id Sample description nTPM
Hippocampus
nTPM: 208.2
1855 Male, age 76, left hemisphere 244.0
1898 Male, age 80, left hemisphere 244.0
2621 Female, age 67, right hemisphere 226.8
1911 Female, age 85, right hemisphere 186.4
2148 Female, age 91, left hemisphere 178.6
2529 Female, age 94, left hemisphere 169.5
Dentate gyrus
nTPM: 204.8
2010 Male, age 76, both hemispheres 242.5
1927 Female, age 91, both hemispheres 226.0
2246 Female, age 85, both hemispheres 212.9
2530 Female, age 94, left hemisphere 198.2
2528 Male, age 74, both hemispheres 188.2
2531 Female, age 67, both hemispheres 160.7
Entorhinal gyrus
nTPM: 192.3
1938 Female, age 85, left hemisphere 229.1
2764 Male, age 80, right hemisphere 204.2
1787 Male, age 76, left hemisphere 203.9
2613 Female, age 94, left hemisphere 193.5
2117 Female, age 91, right hemisphere 176.8
2686 Male, age 75, right hemisphere 146.5
Hippocampus, CA1
nTPM: 228.5
2749 Male, age 80, left hemisphere 286.6
2045 Male, age 76, both hemispheres 238.9
1873 Female, age 85, both hemispheres 238.4
2527 Male, age 74, both hemispheres 194.9
2082 Female, age 91, right hemisphere 183.8
Hippocampus, CA2
nTPM: 209.5
1892 Male, age 76, both hemispheres 263.9
1963 Male, age 80, left hemisphere 228.0
2249 Male, age 74, both hemispheres 210.8
1940 Female, age 85, left hemisphere 196.5
2437 Female, age 94, left hemisphere 181.0
2113 Female, age 91, right hemisphere 177.0
Hippocampus, CA3
nTPM: 207.8
2137 Male, age 80, left hemisphere 239.5
1867 Male, age 76, both hemispheres 231.6
2436 Male, age 74, both hemispheres 216.9
2620 Female, age 94, left hemisphere 198.7
1891 Female, age 85, both hemispheres 198.6
2861 Female, age 67, both hemispheres 161.6
Parahippocampal cortex
nTPM: 200.0
1850 Male, age 80, both hemispheres 239.8
1933 Female, age 85, both hemispheres 221.8
2018 Male, age 76, both hemispheres 216.8
2250 Female, age 67, right hemisphere 213.7
2693 Female, age 94, both hemispheres 193.5
2245 Female, age 91, both hemispheres 191.7
1990 Female, age 91, right hemisphere 191.1
2532 Female, age 72, left hemisphere 187.9
2622 Female, age 67, right hemisphere 175.9
2692 Male, age 74, both hemispheres 167.4
Perirhinal gyrus
nTPM: 234.6
1847 Female, age 91, left hemisphere 268.0
1841 Female, age 85, right hemisphere 241.2
1794 Male, age 80, right hemisphere 229.2
2848 Male, age 76, right hemisphere 223.1
2521 Female, age 94, right hemisphere 211.7
Subiculum
nTPM: 189.2
1977 Female, age 85, both hemispheres 209.5
1901 Male, age 80, both hemispheres 206.7
2042 Male, age 76, both hemispheres 199.1
2619 Male, age 74, both hemispheres 187.6
2729 Female, age 91, right hemisphere 166.4
2438 Female, age 94, left hemisphere 166.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 170.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 170.3
Samples: 197

Max nTPM: 323.7
Min nTPM: 62.8
Std nTPM: 37.7
Median nTPM: 167.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 323.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 293.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 266.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 262.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 257.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 252.0
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 247.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 247.5
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 244.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 241.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 238.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 616.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 616.1
FF:10169-103B7 60 years, female 820.3
FF:10153-102I9 76 years, female 411.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 85.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 85.9
Samples: 4

Max nTPM: 107.1
Min nTPM: 64.3
Sample A Female 107.1
Sample B Female 88.6
Sample C Male 83.4
Sample D Male 64.3
Entorhinal cortex
nTPM: 65.3
Samples: 4

Max nTPM: 73.3
Min nTPM: 54.0
Sample A Female 64.2
Sample B Female 73.3
Sample C Male 69.7
Sample D Male 54.0
Subiculum
nTPM: 78.0
Samples: 4

Max nTPM: 93.3
Min nTPM: 66.4
Sample A Female 93.3
Sample B Female 78.1
Sample C Male 74.3
Sample D Male 66.4
Ventral hippocampus
nTPM: 81.9
Samples: 4

Max nTPM: 99.1
Min nTPM: 61.1
Sample A Female 93.3
Sample B Female 61.1
Sample C Male 99.1
Sample D Male 74.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 261.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 245.7
Samples: 4

Max nTPM: 267.5
Min nTPM: 234.1
Sample A Male 234.1
Sample B Male 235.8
Sample C Female 245.3
Sample D Female 267.5
Hippocampal formation
nTPM: 262.0
Samples: 4

Max nTPM: 287.2
Min nTPM: 245.0
Sample A Male 262.1
Sample B Male 245.0
Sample C Female 287.2
Sample D Female 253.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.9
686217 Antisense, RP_040916_01_C03, Mouse strain C57BL/6J (56 days, male) 18.6
70743884 Antisense, RP_050725_01_H08, Mouse strain C57BL/6J (56 days, male) 17.1

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The Human Protein Atlas

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