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LAMTOR5
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:150.9 nTPM
HPA:150.9 nTPM
GTEx:136.4 nTPM
FANTOM5:82.7 Scaled Tags Per Million
Pig:18.1 nTPM
Mouse:118.9 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006812
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 150.9
Sample id Sample description nTPM
Hippocampus
nTPM: 149.6
1898 Male, age 80, left hemisphere 157.0
1855 Male, age 76, left hemisphere 150.5
2529 Female, age 94, left hemisphere 150.3
2621 Female, age 67, right hemisphere 147.3
1911 Female, age 85, right hemisphere 147.0
2148 Female, age 91, left hemisphere 145.6
Dentate gyrus
nTPM: 148.6
2010 Male, age 76, both hemispheres 157.7
1927 Female, age 91, both hemispheres 149.6
2530 Female, age 94, left hemisphere 148.6
2246 Female, age 85, both hemispheres 148.5
2528 Male, age 74, both hemispheres 147.8
2531 Female, age 67, both hemispheres 139.6
Entorhinal gyrus
nTPM: 145.9
1938 Female, age 85, left hemisphere 150.5
1787 Male, age 76, left hemisphere 149.8
2117 Female, age 91, right hemisphere 147.8
2764 Male, age 80, right hemisphere 147.7
2686 Male, age 75, right hemisphere 141.9
2613 Female, age 94, left hemisphere 137.5
Hippocampus, CA1
nTPM: 150.1
2749 Male, age 80, left hemisphere 154.0
2527 Male, age 74, both hemispheres 151.6
1873 Female, age 85, both hemispheres 150.1
2045 Male, age 76, both hemispheres 149.6
2082 Female, age 91, right hemisphere 145.2
Hippocampus, CA2
nTPM: 150.3
2249 Male, age 74, both hemispheres 161.0
1892 Male, age 76, both hemispheres 154.9
2437 Female, age 94, left hemisphere 148.6
1940 Female, age 85, left hemisphere 147.1
1963 Male, age 80, left hemisphere 146.6
2113 Female, age 91, right hemisphere 143.5
Hippocampus, CA3
nTPM: 148.7
2436 Male, age 74, both hemispheres 156.5
1867 Male, age 76, both hemispheres 155.2
1891 Female, age 85, both hemispheres 149.7
2137 Male, age 80, left hemisphere 147.4
2620 Female, age 94, left hemisphere 142.6
2861 Female, age 67, both hemispheres 140.6
Parahippocampal cortex
nTPM: 145.7
1850 Male, age 80, both hemispheres 154.1
2018 Male, age 76, both hemispheres 152.9
1990 Female, age 91, right hemisphere 147.3
2250 Female, age 67, right hemisphere 147.1
1933 Female, age 85, both hemispheres 146.8
2245 Female, age 91, both hemispheres 145.7
2692 Male, age 74, both hemispheres 141.8
2693 Female, age 94, both hemispheres 141.7
2532 Female, age 72, left hemisphere 141.3
2622 Female, age 67, right hemisphere 138.4
Perirhinal gyrus
nTPM: 150.9
1794 Male, age 80, right hemisphere 155.9
1847 Female, age 91, left hemisphere 154.6
1841 Female, age 85, right hemisphere 153.0
2521 Female, age 94, right hemisphere 147.2
2848 Male, age 76, right hemisphere 144.0
Subiculum
nTPM: 148.3
1977 Female, age 85, both hemispheres 150.7
2438 Female, age 94, left hemisphere 149.1
2042 Male, age 76, both hemispheres 148.0
1901 Male, age 80, both hemispheres 147.7
2619 Male, age 74, both hemispheres 147.2
2729 Female, age 91, right hemisphere 146.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 136.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 136.4
Samples: 197

Max nTPM: 373.9
Min nTPM: 92.8
Std nTPM: 31.4
Median nTPM: 132.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 373.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 227.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 222.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 222.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 218.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 210.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 198.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 197.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 197.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 190.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 190.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 82.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 82.7
FF:10169-103B7 60 years, female 94.1
FF:10153-102I9 76 years, female 71.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.1
Samples: 4

Max nTPM: 24.4
Min nTPM: 14.5
Sample A Female 24.4
Sample B Female 16.3
Sample C Male 17.2
Sample D Male 14.5
Entorhinal cortex
nTPM: 16.0
Samples: 4

Max nTPM: 19.1
Min nTPM: 12.8
Sample A Female 15.7
Sample B Female 19.1
Sample C Male 16.5
Sample D Male 12.8
Subiculum
nTPM: 14.2
Samples: 4

Max nTPM: 17.7
Min nTPM: 11.9
Sample A Female 17.7
Sample B Female 13.9
Sample C Male 11.9
Sample D Male 13.4
Ventral hippocampus
nTPM: 16.4
Samples: 4

Max nTPM: 18.3
Min nTPM: 14.9
Sample A Female 18.3
Sample B Female 14.9
Sample C Male 16.3
Sample D Male 16.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 118.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 107.8
Samples: 4

Max nTPM: 124.0
Min nTPM: 94.3
Sample A Male 101.1
Sample B Male 111.9
Sample C Female 124.0
Sample D Female 94.3
Hippocampal formation
nTPM: 119.0
Samples: 4

Max nTPM: 129.3
Min nTPM: 110.1
Sample A Male 129.3
Sample B Male 110.1
Sample C Female 116.4
Sample D Female 120.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
69134163 Antisense, RP_050321_02_D10, Mouse strain C57BL/6J (56 days, male) 3.1

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