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TIMM17A
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:31.3 nTPM
HPA:31.3 nTPM
GTEx:33.4 nTPM
FANTOM5:79.9 Scaled Tags Per Million
Pig:38.6 nTPM
Mouse:47.3 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010083
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.3
Sample id Sample description nTPM
Hippocampus
nTPM: 29.4
1898 Male, age 80, left hemisphere 35.0
1855 Male, age 76, left hemisphere 28.7
2529 Female, age 94, left hemisphere 28.6
2621 Female, age 67, right hemisphere 28.5
2148 Female, age 91, left hemisphere 28.4
1911 Female, age 85, right hemisphere 26.9
Dentate gyrus
nTPM: 29.1
1927 Female, age 91, both hemispheres 31.3
2010 Male, age 76, both hemispheres 30.0
2528 Male, age 74, both hemispheres 29.3
2530 Female, age 94, left hemisphere 28.8
2246 Female, age 85, both hemispheres 28.7
2531 Female, age 67, both hemispheres 26.4
Entorhinal gyrus
nTPM: 28.3
2764 Male, age 80, right hemisphere 29.8
1938 Female, age 85, left hemisphere 28.8
1787 Male, age 76, left hemisphere 28.3
2117 Female, age 91, right hemisphere 28.2
2686 Male, age 75, right hemisphere 28.2
2613 Female, age 94, left hemisphere 26.8
Hippocampus, CA1
nTPM: 31.3
2749 Male, age 80, left hemisphere 39.2
1873 Female, age 85, both hemispheres 31.3
2527 Male, age 74, both hemispheres 30.6
2045 Male, age 76, both hemispheres 28.1
2082 Female, age 91, right hemisphere 27.3
Hippocampus, CA2
nTPM: 30.2
1963 Male, age 80, left hemisphere 34.3
1892 Male, age 76, both hemispheres 33.1
2249 Male, age 74, both hemispheres 29.7
2437 Female, age 94, left hemisphere 28.6
1940 Female, age 85, left hemisphere 28.3
2113 Female, age 91, right hemisphere 27.3
Hippocampus, CA3
nTPM: 29.2
2137 Male, age 80, left hemisphere 33.1
1867 Male, age 76, both hemispheres 31.0
2436 Male, age 74, both hemispheres 29.7
1891 Female, age 85, both hemispheres 28.7
2620 Female, age 94, left hemisphere 26.7
2861 Female, age 67, both hemispheres 25.8
Parahippocampal cortex
nTPM: 28.7
1850 Male, age 80, both hemispheres 33.0
1990 Female, age 91, right hemisphere 29.9
2245 Female, age 91, both hemispheres 29.0
1933 Female, age 85, both hemispheres 28.6
2250 Female, age 67, right hemisphere 28.5
2018 Male, age 76, both hemispheres 28.3
2693 Female, age 94, both hemispheres 27.9
2532 Female, age 72, left hemisphere 27.8
2692 Male, age 74, both hemispheres 27.5
2622 Female, age 67, right hemisphere 26.2
Perirhinal gyrus
nTPM: 30.4
1847 Female, age 91, left hemisphere 33.3
1794 Male, age 80, right hemisphere 31.5
1841 Female, age 85, right hemisphere 30.7
2521 Female, age 94, right hemisphere 29.4
2848 Male, age 76, right hemisphere 27.3
Subiculum
nTPM: 28.3
1901 Male, age 80, both hemispheres 31.1
1977 Female, age 85, both hemispheres 29.2
2619 Male, age 74, both hemispheres 28.5
2438 Female, age 94, left hemisphere 27.3
2729 Female, age 91, right hemisphere 27.0
2042 Male, age 76, both hemispheres 26.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.4
Samples: 197

Max nTPM: 79.3
Min nTPM: 15.4
Std nTPM: 11.3
Median nTPM: 31.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 79.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 65.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 61.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 60.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 60.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 60.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 60.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 57.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 56.2
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 56.2
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 56.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 79.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 79.9
FF:10169-103B7 60 years, female 117.1
FF:10153-102I9 76 years, female 42.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 38.6
Samples: 4

Max nTPM: 52.7
Min nTPM: 26.5
Sample A Female 52.7
Sample B Female 35.6
Sample C Male 39.5
Sample D Male 26.5
Entorhinal cortex
nTPM: 29.1
Samples: 4

Max nTPM: 32.8
Min nTPM: 24.5
Sample A Female 31.5
Sample B Female 32.8
Sample C Male 27.5
Sample D Male 24.5
Subiculum
nTPM: 27.5
Samples: 4

Max nTPM: 39.4
Min nTPM: 21.4
Sample A Female 39.4
Sample B Female 24.1
Sample C Male 25.1
Sample D Male 21.4
Ventral hippocampus
nTPM: 33.7
Samples: 4

Max nTPM: 39.7
Min nTPM: 20.8
Sample A Female 39.7
Sample B Female 20.8
Sample C Male 38.5
Sample D Male 35.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.4
Samples: 4

Max nTPM: 52.6
Min nTPM: 39.7
Sample A Male 39.7
Sample B Male 52.6
Sample C Female 47.0
Sample D Female 50.1
Hippocampal formation
nTPM: 45.5
Samples: 4

Max nTPM: 55.4
Min nTPM: 41.2
Sample A Male 55.4
Sample B Male 41.6
Sample C Female 41.2
Sample D Female 43.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
80471955 Antisense, RP_070208_04_F05, Mouse strain C57BL/6J (56 days, male) 0.1

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