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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:15.8 nTPM
HPA:15.8 nTPM
GTEx:10.0 nTPM
FANTOM5:42.7 Scaled Tags Per Million
Pig:3.4 nTPM
Mouse:0.2 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061250Antibody HPA063127
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.8
Sample id Sample description nTPM
Hippocampus
nTPM: 15.8
1911 Female, age 85, right hemisphere 17.9
2148 Female, age 91, left hemisphere 17.0
2529 Female, age 94, left hemisphere 16.4
1898 Male, age 80, left hemisphere 14.9
2621 Female, age 67, right hemisphere 14.8
1855 Male, age 76, left hemisphere 13.9
Dentate gyrus
nTPM: 15.7
2528 Male, age 74, both hemispheres 18.0
2246 Female, age 85, both hemispheres 17.4
1927 Female, age 91, both hemispheres 16.6
2531 Female, age 67, both hemispheres 14.9
2010 Male, age 76, both hemispheres 14.6
2530 Female, age 94, left hemisphere 12.9
Entorhinal gyrus
nTPM: 14.2
2117 Female, age 91, right hemisphere 16.1
1938 Female, age 85, left hemisphere 14.9
2686 Male, age 75, right hemisphere 14.2
1787 Male, age 76, left hemisphere 14.1
2764 Male, age 80, right hemisphere 13.2
2613 Female, age 94, left hemisphere 12.7
Hippocampus, CA1
nTPM: 15.6
2082 Female, age 91, right hemisphere 18.2
2527 Male, age 74, both hemispheres 16.7
1873 Female, age 85, both hemispheres 16.2
2045 Male, age 76, both hemispheres 14.1
2749 Male, age 80, left hemisphere 13.0
Hippocampus, CA2
nTPM: 15.1
2249 Male, age 74, both hemispheres 17.5
2113 Female, age 91, right hemisphere 17.1
1940 Female, age 85, left hemisphere 16.7
1963 Male, age 80, left hemisphere 13.8
2437 Female, age 94, left hemisphere 13.0
1892 Male, age 76, both hemispheres 12.7
Hippocampus, CA3
nTPM: 14.7
1891 Female, age 85, both hemispheres 16.9
2436 Male, age 74, both hemispheres 14.9
2620 Female, age 94, left hemisphere 14.7
2861 Female, age 67, both hemispheres 14.5
2137 Male, age 80, left hemisphere 14.0
1867 Male, age 76, both hemispheres 13.0
Parahippocampal cortex
nTPM: 15.3
2692 Male, age 74, both hemispheres 17.7
2622 Female, age 67, right hemisphere 16.6
2250 Female, age 67, right hemisphere 15.8
1933 Female, age 85, both hemispheres 15.4
2245 Female, age 91, both hemispheres 15.0
1850 Male, age 80, both hemispheres 14.9
2693 Female, age 94, both hemispheres 14.9
1990 Female, age 91, right hemisphere 14.3
2018 Male, age 76, both hemispheres 14.0
2532 Female, age 72, left hemisphere 13.9
Perirhinal gyrus
nTPM: 14.3
1794 Male, age 80, right hemisphere 14.9
1841 Female, age 85, right hemisphere 14.9
1847 Female, age 91, left hemisphere 14.2
2521 Female, age 94, right hemisphere 14.0
2848 Male, age 76, right hemisphere 13.7
Subiculum
nTPM: 14.9
2619 Male, age 74, both hemispheres 18.0
2729 Female, age 91, right hemisphere 17.3
1977 Female, age 85, both hemispheres 14.8
2042 Male, age 76, both hemispheres 13.5
1901 Male, age 80, both hemispheres 13.1
2438 Female, age 94, left hemisphere 12.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.0
Samples: 197

Max nTPM: 29.2
Min nTPM: 1.1
Std nTPM: 4.8
Median nTPM: 8.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 29.2
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 27.8
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 27.1
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 24.9
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 24.6
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 24.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 24.0
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 21.9
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 20.5
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 20.4
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 18.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.7
FF:10169-103B7 60 years, female 47.0
FF:10153-102I9 76 years, female 38.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.4
Samples: 4

Max nTPM: 4.4
Min nTPM: 2.3
Sample A Female 2.3
Sample B Female 4.1
Sample C Male 2.8
Sample D Male 4.4
Entorhinal cortex
nTPM: 1.6
Samples: 4

Max nTPM: 1.8
Min nTPM: 1.1
Sample A Female 1.1
Sample B Female 1.8
Sample C Male 1.8
Sample D Male 1.5
Subiculum
nTPM: 1.8
Samples: 4

Max nTPM: 3.0
Min nTPM: 1.3
Sample A Female 1.3
Sample B Female 3.0
Sample C Male 1.4
Sample D Male 1.6
Ventral hippocampus
nTPM: 2.7
Samples: 4

Max nTPM: 3.7
Min nTPM: 1.5
Sample A Female 1.5
Sample B Female 3.7
Sample C Male 3.1
Sample D Male 2.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.2
Samples: 4

Max nTPM: 0.4
Min nTPM: 0.1
Sample A Male 0.1
Sample B Male 0.2
Sample C Female 0.1
Sample D Female 0.4
Hippocampal formation
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.0
Sample A Male 0.2
Sample B Male 0.1
Sample C Female 0.0
Sample D Female 0.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
77924540 Antisense, RP_070219_02_B11, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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