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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:53.4 nTPM
HPA:53.4 nTPM
GTEx:51.7 nTPM
FANTOM5:257.1 Scaled Tags Per Million
Pig:94.8 nTPM
Mouse:144.1 nTPM
Allen mouse:11.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040017Antibody CAB034257
Glial cells Not detectedMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.4
Sample id Sample description nTPM
Hippocampus
nTPM: 52.2
1898 Male, age 80, left hemisphere 58.9
2621 Female, age 67, right hemisphere 56.2
2529 Female, age 94, left hemisphere 51.5
1855 Male, age 76, left hemisphere 49.7
2148 Female, age 91, left hemisphere 49.7
1911 Female, age 85, right hemisphere 47.2
Dentate gyrus
nTPM: 49.8
2010 Male, age 76, both hemispheres 53.3
1927 Female, age 91, both hemispheres 51.6
2246 Female, age 85, both hemispheres 49.6
2531 Female, age 67, both hemispheres 49.5
2530 Female, age 94, left hemisphere 48.3
2528 Male, age 74, both hemispheres 46.2
Entorhinal gyrus
nTPM: 47.9
1938 Female, age 85, left hemisphere 50.3
2764 Male, age 80, right hemisphere 49.4
1787 Male, age 76, left hemisphere 48.3
2686 Male, age 75, right hemisphere 47.3
2117 Female, age 91, right hemisphere 46.6
2613 Female, age 94, left hemisphere 45.6
Hippocampus, CA1
nTPM: 52.1
2749 Male, age 80, left hemisphere 64.2
1873 Female, age 85, both hemispheres 53.2
2527 Male, age 74, both hemispheres 52.5
2045 Male, age 76, both hemispheres 47.7
2082 Female, age 91, right hemisphere 42.6
Hippocampus, CA2
nTPM: 51.6
1892 Male, age 76, both hemispheres 63.3
1963 Male, age 80, left hemisphere 55.9
2249 Male, age 74, both hemispheres 48.9
1940 Female, age 85, left hemisphere 48.5
2437 Female, age 94, left hemisphere 47.6
2113 Female, age 91, right hemisphere 45.2
Hippocampus, CA3
nTPM: 51.4
2137 Male, age 80, left hemisphere 56.5
1867 Male, age 76, both hemispheres 56.0
2436 Male, age 74, both hemispheres 53.2
1891 Female, age 85, both hemispheres 50.2
2620 Female, age 94, left hemisphere 49.0
2861 Female, age 67, both hemispheres 43.7
Parahippocampal cortex
nTPM: 50.7
1850 Male, age 80, both hemispheres 56.7
2245 Female, age 91, both hemispheres 55.8
2532 Female, age 72, left hemisphere 54.3
2692 Male, age 74, both hemispheres 51.1
1990 Female, age 91, right hemisphere 50.4
2622 Female, age 67, right hemisphere 50.2
1933 Female, age 85, both hemispheres 49.9
2250 Female, age 67, right hemisphere 47.8
2018 Male, age 76, both hemispheres 46.6
2693 Female, age 94, both hemispheres 44.5
Perirhinal gyrus
nTPM: 53.4
1841 Female, age 85, right hemisphere 55.0
1794 Male, age 80, right hemisphere 54.6
1847 Female, age 91, left hemisphere 54.0
2521 Female, age 94, right hemisphere 54.0
2848 Male, age 76, right hemisphere 49.4
Subiculum
nTPM: 48.5
1901 Male, age 80, both hemispheres 52.7
1977 Female, age 85, both hemispheres 50.4
2438 Female, age 94, left hemisphere 49.2
2042 Male, age 76, both hemispheres 48.0
2619 Male, age 74, both hemispheres 47.3
2729 Female, age 91, right hemisphere 43.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 51.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 51.7
Samples: 197

Max nTPM: 94.1
Min nTPM: 29.9
Std nTPM: 11.6
Median nTPM: 49.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 94.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 89.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 84.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 83.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 80.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 78.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 76.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 76.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 75.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 73.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 71.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 257.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 257.1
FF:10169-103B7 60 years, female 336.9
FF:10153-102I9 76 years, female 177.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 94.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 94.8
Samples: 4

Max nTPM: 108.7
Min nTPM: 75.6
Sample A Female 108.7
Sample B Female 92.8
Sample C Male 102.1
Sample D Male 75.6
Entorhinal cortex
nTPM: 80.7
Samples: 4

Max nTPM: 89.2
Min nTPM: 73.0
Sample A Female 84.7
Sample B Female 89.2
Sample C Male 75.8
Sample D Male 73.0
Subiculum
nTPM: 80.0
Samples: 4

Max nTPM: 99.2
Min nTPM: 72.1
Sample A Female 99.2
Sample B Female 73.7
Sample C Male 72.1
Sample D Male 75.1
Ventral hippocampus
nTPM: 83.6
Samples: 4

Max nTPM: 97.6
Min nTPM: 64.7
Sample A Female 97.6
Sample B Female 64.7
Sample C Male 79.2
Sample D Male 93.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 144.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 144.1
Samples: 4

Max nTPM: 152.9
Min nTPM: 139.4
Sample A Male 139.4
Sample B Male 144.6
Sample C Female 139.5
Sample D Female 152.9
Hippocampal formation
nTPM: 142.5
Samples: 4

Max nTPM: 159.3
Min nTPM: 133.4
Sample A Male 133.4
Sample B Male 143.3
Sample C Female 159.3
Sample D Female 133.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.1
68667829 Antisense, RP_050201_02_H09, Mouse strain C57BL/6J (56 days, male) 11.1

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