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PHC2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:56.0 nTPM
HPA:56.0 nTPM
GTEx:58.8 nTPM
FANTOM5:81.7 Scaled Tags Per Million
Pig:20.8 nTPM
Mouse:47.6 nTPM
Allen mouse:9.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047403
Glial cells Medium
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 56.0
Sample id Sample description nTPM
Hippocampus
nTPM: 54.7
2621 Female, age 67, right hemisphere 56.5
2148 Female, age 91, left hemisphere 55.1
1911 Female, age 85, right hemisphere 54.7
1898 Male, age 80, left hemisphere 54.6
1855 Male, age 76, left hemisphere 54.5
2529 Female, age 94, left hemisphere 52.9
Dentate gyrus
nTPM: 54.6
2530 Female, age 94, left hemisphere 58.6
2010 Male, age 76, both hemispheres 55.6
2531 Female, age 67, both hemispheres 55.5
2528 Male, age 74, both hemispheres 53.3
2246 Female, age 85, both hemispheres 52.5
1927 Female, age 91, both hemispheres 52.3
Entorhinal gyrus
nTPM: 56.0
2117 Female, age 91, right hemisphere 60.0
2613 Female, age 94, left hemisphere 57.9
2764 Male, age 80, right hemisphere 57.5
1787 Male, age 76, left hemisphere 54.6
2686 Male, age 75, right hemisphere 54.0
1938 Female, age 85, left hemisphere 52.0
Hippocampus, CA1
nTPM: 53.8
2749 Male, age 80, left hemisphere 55.7
1873 Female, age 85, both hemispheres 54.8
2045 Male, age 76, both hemispheres 54.0
2527 Male, age 74, both hemispheres 52.7
2082 Female, age 91, right hemisphere 52.1
Hippocampus, CA2
nTPM: 53.8
1963 Male, age 80, left hemisphere 56.8
2437 Female, age 94, left hemisphere 54.9
2249 Male, age 74, both hemispheres 53.8
1940 Female, age 85, left hemisphere 53.7
2113 Female, age 91, right hemisphere 52.5
1892 Male, age 76, both hemispheres 51.0
Hippocampus, CA3
nTPM: 55.6
2620 Female, age 94, left hemisphere 59.4
2436 Male, age 74, both hemispheres 55.6
2861 Female, age 67, both hemispheres 55.6
1891 Female, age 85, both hemispheres 54.6
1867 Male, age 76, both hemispheres 54.4
2137 Male, age 80, left hemisphere 53.9
Parahippocampal cortex
nTPM: 52.8
2018 Male, age 76, both hemispheres 58.2
2532 Female, age 72, left hemisphere 55.9
2692 Male, age 74, both hemispheres 53.3
1990 Female, age 91, right hemisphere 52.6
2245 Female, age 91, both hemispheres 52.6
1933 Female, age 85, both hemispheres 52.2
1850 Male, age 80, both hemispheres 51.4
2693 Female, age 94, both hemispheres 51.3
2622 Female, age 67, right hemisphere 50.8
2250 Female, age 67, right hemisphere 49.6
Perirhinal gyrus
nTPM: 51.2
2521 Female, age 94, right hemisphere 52.7
1841 Female, age 85, right hemisphere 52.6
1794 Male, age 80, right hemisphere 51.4
1847 Female, age 91, left hemisphere 50.3
2848 Male, age 76, right hemisphere 49.2
Subiculum
nTPM: 56.0
1901 Male, age 80, both hemispheres 58.2
2042 Male, age 76, both hemispheres 57.8
2729 Female, age 91, right hemisphere 56.5
2619 Male, age 74, both hemispheres 55.6
1977 Female, age 85, both hemispheres 55.1
2438 Female, age 94, left hemisphere 52.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.8
Samples: 197

Max nTPM: 124.4
Min nTPM: 32.9
Std nTPM: 15.9
Median nTPM: 55.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 124.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 119.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 111.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 108.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 101.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 100.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 100.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 99.6
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 95.2
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 94.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 90.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 81.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 81.7
FF:10153-102I9 76 years, female 89.2
FF:10169-103B7 60 years, female 74.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.9
Samples: 4

Max nTPM: 24.5
Min nTPM: 18.2
Sample A Female 24.5
Sample B Female 20.9
Sample C Male 19.8
Sample D Male 18.2
Entorhinal cortex
nTPM: 16.0
Samples: 4

Max nTPM: 17.2
Min nTPM: 14.6
Sample A Female 17.2
Sample B Female 16.7
Sample C Male 15.6
Sample D Male 14.6
Subiculum
nTPM: 15.5
Samples: 4

Max nTPM: 19.0
Min nTPM: 14.0
Sample A Female 19.0
Sample B Female 14.0
Sample C Male 14.3
Sample D Male 14.5
Ventral hippocampus
nTPM: 18.8
Samples: 4

Max nTPM: 22.3
Min nTPM: 14.0
Sample A Female 18.0
Sample B Female 14.0
Sample C Male 20.7
Sample D Male 22.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.3
Samples: 4

Max nTPM: 44.4
Min nTPM: 42.0
Sample A Male 44.2
Sample B Male 44.4
Sample C Female 42.0
Sample D Female 42.7
Hippocampal formation
nTPM: 47.6
Samples: 4

Max nTPM: 53.0
Min nTPM: 42.7
Sample A Male 42.7
Sample B Male 47.1
Sample C Female 53.0
Sample D Female 47.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.8
68844492 Antisense, RP_050222_01_G08, Mouse strain C57BL/6J (56 days, male) 9.8

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The Human Protein Atlas

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