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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:26.8 nTPM
HPA:26.8 nTPM
GTEx:23.8 nTPM
FANTOM5:50.9 Scaled Tags Per Million
Pig:11.8 nTPM
Mouse:12.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027412Antibody HPA027973
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.8
Sample id Sample description nTPM
Hippocampus
nTPM: 25.1
1911 Female, age 85, right hemisphere 27.9
2529 Female, age 94, left hemisphere 26.3
2148 Female, age 91, left hemisphere 25.1
2621 Female, age 67, right hemisphere 24.5
1855 Male, age 76, left hemisphere 23.9
1898 Male, age 80, left hemisphere 22.8
Dentate gyrus
nTPM: 25.6
2531 Female, age 67, both hemispheres 27.9
2246 Female, age 85, both hemispheres 26.7
2010 Male, age 76, both hemispheres 26.2
1927 Female, age 91, both hemispheres 25.3
2530 Female, age 94, left hemisphere 24.1
2528 Male, age 74, both hemispheres 23.5
Entorhinal gyrus
nTPM: 25.5
2686 Male, age 75, right hemisphere 27.7
2613 Female, age 94, left hemisphere 27.4
2117 Female, age 91, right hemisphere 26.2
1938 Female, age 85, left hemisphere 24.8
1787 Male, age 76, left hemisphere 24.1
2764 Male, age 80, right hemisphere 22.8
Hippocampus, CA1
nTPM: 24.8
2045 Male, age 76, both hemispheres 26.8
1873 Female, age 85, both hemispheres 25.7
2082 Female, age 91, right hemisphere 25.5
2527 Male, age 74, both hemispheres 24.7
2749 Male, age 80, left hemisphere 21.3
Hippocampus, CA2
nTPM: 23.9
2437 Female, age 94, left hemisphere 26.1
2113 Female, age 91, right hemisphere 26.0
1940 Female, age 85, left hemisphere 23.5
2249 Male, age 74, both hemispheres 23.3
1963 Male, age 80, left hemisphere 23.0
1892 Male, age 76, both hemispheres 21.8
Hippocampus, CA3
nTPM: 25.5
2861 Female, age 67, both hemispheres 26.7
2620 Female, age 94, left hemisphere 26.3
1891 Female, age 85, both hemispheres 25.7
2436 Male, age 74, both hemispheres 25.6
1867 Male, age 76, both hemispheres 24.4
2137 Male, age 80, left hemisphere 24.3
Parahippocampal cortex
nTPM: 26.8
2622 Female, age 67, right hemisphere 29.4
2692 Male, age 74, both hemispheres 29.3
2693 Female, age 94, both hemispheres 28.5
2018 Male, age 76, both hemispheres 27.5
1850 Male, age 80, both hemispheres 26.3
2532 Female, age 72, left hemisphere 26.1
1933 Female, age 85, both hemispheres 25.8
1990 Female, age 91, right hemisphere 25.7
2250 Female, age 67, right hemisphere 24.8
2245 Female, age 91, both hemispheres 24.4
Perirhinal gyrus
nTPM: 25.5
1841 Female, age 85, right hemisphere 27.3
2848 Male, age 76, right hemisphere 26.8
2521 Female, age 94, right hemisphere 25.4
1794 Male, age 80, right hemisphere 24.5
1847 Female, age 91, left hemisphere 23.5
Subiculum
nTPM: 26.0
2729 Female, age 91, right hemisphere 28.0
2619 Male, age 74, both hemispheres 26.5
2042 Male, age 76, both hemispheres 26.4
2438 Female, age 94, left hemisphere 25.7
1901 Male, age 80, both hemispheres 25.2
1977 Female, age 85, both hemispheres 24.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.8
Samples: 197

Max nTPM: 51.5
Min nTPM: 6.3
Std nTPM: 6.7
Median nTPM: 23.0
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 51.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 47.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 44.1
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 40.9
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 39.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 38.6
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 37.0
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 36.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 36.2
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 36.0
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 35.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.9
FF:10153-102I9 76 years, female 53.8
FF:10169-103B7 60 years, female 48.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.4
Samples: 4

Max nTPM: 11.7
Min nTPM: 9.2
Sample A Female 9.2
Sample B Female 9.9
Sample C Male 11.7
Sample D Male 10.6
Entorhinal cortex
nTPM: 11.1
Samples: 4

Max nTPM: 11.9
Min nTPM: 10.5
Sample A Female 11.9
Sample B Female 10.5
Sample C Male 10.9
Sample D Male 11.0
Subiculum
nTPM: 11.8
Samples: 4

Max nTPM: 12.1
Min nTPM: 11.6
Sample A Female 11.9
Sample B Female 11.7
Sample C Male 11.6
Sample D Male 12.1
Ventral hippocampus
nTPM: 10.3
Samples: 4

Max nTPM: 11.6
Min nTPM: 9.1
Sample A Female 11.3
Sample B Female 11.6
Sample C Male 9.1
Sample D Male 9.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.1
Samples: 4

Max nTPM: 14.4
Min nTPM: 8.9
Sample A Male 13.0
Sample B Male 14.4
Sample C Female 12.2
Sample D Female 8.9
Hippocampal formation
nTPM: 11.5
Samples: 4

Max nTPM: 13.5
Min nTPM: 9.4
Sample A Male 13.5
Sample B Male 12.7
Sample C Female 10.3
Sample D Female 9.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
74277333 Antisense, RP_051121_03_H01, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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