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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:131.8 nTPM
HPA:131.8 nTPM
GTEx:105.0 nTPM
FANTOM5:160.9 Scaled Tags Per Million
Pig:145.9 nTPM
Mouse:141.2 nTPM
Allen mouse:5.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006741
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 131.8
Sample id Sample description nTPM
Hippocampus
nTPM: 131.8
2148 Female, age 91, left hemisphere 148.2
1898 Male, age 80, left hemisphere 136.3
1911 Female, age 85, right hemisphere 134.6
1855 Male, age 76, left hemisphere 131.2
2529 Female, age 94, left hemisphere 123.8
2621 Female, age 67, right hemisphere 116.7
Dentate gyrus
nTPM: 124.1
2528 Male, age 74, both hemispheres 148.0
2246 Female, age 85, both hemispheres 128.2
2530 Female, age 94, left hemisphere 127.2
2531 Female, age 67, both hemispheres 114.6
2010 Male, age 76, both hemispheres 113.6
1927 Female, age 91, both hemispheres 113.1
Entorhinal gyrus
nTPM: 116.1
2117 Female, age 91, right hemisphere 145.5
2686 Male, age 75, right hemisphere 124.4
1938 Female, age 85, left hemisphere 112.3
1787 Male, age 76, left hemisphere 109.7
2764 Male, age 80, right hemisphere 107.3
2613 Female, age 94, left hemisphere 97.4
Hippocampus, CA1
nTPM: 123.2
1873 Female, age 85, both hemispheres 143.0
2527 Male, age 74, both hemispheres 128.8
2082 Female, age 91, right hemisphere 120.8
2045 Male, age 76, both hemispheres 113.3
2749 Male, age 80, left hemisphere 110.0
Hippocampus, CA2
nTPM: 124.2
1963 Male, age 80, left hemisphere 143.2
2249 Male, age 74, both hemispheres 132.1
1940 Female, age 85, left hemisphere 130.8
2437 Female, age 94, left hemisphere 130.7
2113 Female, age 91, right hemisphere 116.9
1892 Male, age 76, both hemispheres 91.7
Hippocampus, CA3
nTPM: 114.7
2436 Male, age 74, both hemispheres 134.0
1891 Female, age 85, both hemispheres 131.0
2861 Female, age 67, both hemispheres 127.8
2620 Female, age 94, left hemisphere 109.9
1867 Male, age 76, both hemispheres 96.2
2137 Male, age 80, left hemisphere 89.6
Parahippocampal cortex
nTPM: 104.5
2250 Female, age 67, right hemisphere 125.0
2692 Male, age 74, both hemispheres 117.3
2622 Female, age 67, right hemisphere 111.9
1933 Female, age 85, both hemispheres 111.7
2018 Male, age 76, both hemispheres 99.0
2693 Female, age 94, both hemispheres 98.4
2532 Female, age 72, left hemisphere 98.3
2245 Female, age 91, both hemispheres 96.7
1850 Male, age 80, both hemispheres 94.1
1990 Female, age 91, right hemisphere 92.5
Perirhinal gyrus
nTPM: 93.8
2521 Female, age 94, right hemisphere 95.5
1847 Female, age 91, left hemisphere 95.0
2848 Male, age 76, right hemisphere 94.6
1841 Female, age 85, right hemisphere 93.2
1794 Male, age 80, right hemisphere 90.9
Subiculum
nTPM: 116.0
2729 Female, age 91, right hemisphere 164.6
2619 Male, age 74, both hemispheres 116.7
2042 Male, age 76, both hemispheres 107.4
1977 Female, age 85, both hemispheres 107.3
1901 Male, age 80, both hemispheres 100.5
2438 Female, age 94, left hemisphere 99.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 105.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 105.0
Samples: 197

Max nTPM: 199.2
Min nTPM: 28.1
Std nTPM: 36.0
Median nTPM: 97.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 199.2
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 198.7
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 190.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 182.4
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 182.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 181.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 180.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 180.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 177.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 175.9
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 175.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 160.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 160.9
FF:10153-102I9 76 years, female 192.2
FF:10169-103B7 60 years, female 129.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 145.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 104.5
Samples: 4

Max nTPM: 112.3
Min nTPM: 90.7
Sample A Female 112.3
Sample B Female 107.6
Sample C Male 107.4
Sample D Male 90.7
Entorhinal cortex
nTPM: 130.2
Samples: 4

Max nTPM: 145.4
Min nTPM: 113.4
Sample A Female 123.8
Sample B Female 138.0
Sample C Male 145.4
Sample D Male 113.4
Subiculum
nTPM: 145.9
Samples: 4

Max nTPM: 160.8
Min nTPM: 121.3
Sample A Female 160.8
Sample B Female 155.2
Sample C Male 146.2
Sample D Male 121.3
Ventral hippocampus
nTPM: 136.5
Samples: 4

Max nTPM: 188.5
Min nTPM: 107.5
Sample A Female 119.8
Sample B Female 130.3
Sample C Male 188.5
Sample D Male 107.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 141.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 139.0
Samples: 4

Max nTPM: 150.4
Min nTPM: 122.5
Sample A Male 134.8
Sample B Male 122.5
Sample C Female 148.2
Sample D Female 150.4
Hippocampal formation
nTPM: 141.2
Samples: 4

Max nTPM: 157.7
Min nTPM: 125.1
Sample A Male 157.7
Sample B Male 134.4
Sample C Female 125.1
Sample D Female 147.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.0
69015290 Antisense, RP_050310_02_F08, Mouse strain C57BL/6J (56 days, male) 5.0

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The Human Protein Atlas

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