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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:122.6 nTPM
HPA:122.6 nTPM
GTEx:113.3 nTPM
FANTOM5:66.8 Scaled Tags Per Million
Pig:21.9 nTPM
Mouse:86.0 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044602
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 122.6
Sample id Sample description nTPM
Hippocampus
nTPM: 121.3
1898 Male, age 80, left hemisphere 125.4
1855 Male, age 76, left hemisphere 122.3
1911 Female, age 85, right hemisphere 122.0
2529 Female, age 94, left hemisphere 120.9
2621 Female, age 67, right hemisphere 120.7
2148 Female, age 91, left hemisphere 116.2
Dentate gyrus
nTPM: 120.3
2530 Female, age 94, left hemisphere 123.0
2010 Male, age 76, both hemispheres 121.6
1927 Female, age 91, both hemispheres 120.3
2528 Male, age 74, both hemispheres 120.3
2246 Female, age 85, both hemispheres 118.7
2531 Female, age 67, both hemispheres 117.8
Entorhinal gyrus
nTPM: 121.6
2117 Female, age 91, right hemisphere 126.1
1938 Female, age 85, left hemisphere 123.0
2764 Male, age 80, right hemisphere 121.4
2686 Male, age 75, right hemisphere 120.9
1787 Male, age 76, left hemisphere 120.3
2613 Female, age 94, left hemisphere 118.0
Hippocampus, CA1
nTPM: 121.8
2749 Male, age 80, left hemisphere 125.2
1873 Female, age 85, both hemispheres 121.8
2082 Female, age 91, right hemisphere 121.6
2527 Male, age 74, both hemispheres 120.7
2045 Male, age 76, both hemispheres 119.4
Hippocampus, CA2
nTPM: 122.2
2249 Male, age 74, both hemispheres 127.7
1963 Male, age 80, left hemisphere 123.7
1892 Male, age 76, both hemispheres 122.6
1940 Female, age 85, left hemisphere 120.1
2113 Female, age 91, right hemisphere 119.8
2437 Female, age 94, left hemisphere 119.4
Hippocampus, CA3
nTPM: 119.7
1867 Male, age 76, both hemispheres 123.9
1891 Female, age 85, both hemispheres 123.3
2436 Male, age 74, both hemispheres 122.3
2137 Male, age 80, left hemisphere 119.5
2620 Female, age 94, left hemisphere 115.3
2861 Female, age 67, both hemispheres 113.7
Parahippocampal cortex
nTPM: 120.3
2018 Male, age 76, both hemispheres 123.3
1933 Female, age 85, both hemispheres 123.2
1850 Male, age 80, both hemispheres 122.6
1990 Female, age 91, right hemisphere 122.2
2692 Male, age 74, both hemispheres 120.9
2250 Female, age 67, right hemisphere 120.2
2532 Female, age 72, left hemisphere 120.0
2693 Female, age 94, both hemispheres 118.2
2245 Female, age 91, both hemispheres 118.1
2622 Female, age 67, right hemisphere 114.4
Perirhinal gyrus
nTPM: 121.7
1794 Male, age 80, right hemisphere 123.6
1841 Female, age 85, right hemisphere 123.5
1847 Female, age 91, left hemisphere 122.9
2848 Male, age 76, right hemisphere 119.3
2521 Female, age 94, right hemisphere 119.2
Subiculum
nTPM: 122.6
1977 Female, age 85, both hemispheres 126.9
1901 Male, age 80, both hemispheres 126.1
2042 Male, age 76, both hemispheres 124.0
2619 Male, age 74, both hemispheres 121.2
2729 Female, age 91, right hemisphere 119.1
2438 Female, age 94, left hemisphere 118.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 113.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 113.3
Samples: 197

Max nTPM: 219.0
Min nTPM: 58.9
Std nTPM: 27.1
Median nTPM: 109.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 219.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 209.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 200.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 195.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 178.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 177.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 175.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 172.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 167.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 161.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 159.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 66.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.8
FF:10169-103B7 60 years, female 69.0
FF:10153-102I9 76 years, female 64.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.9
Samples: 4

Max nTPM: 33.3
Min nTPM: 12.5
Sample A Female 33.3
Sample B Female 17.9
Sample C Male 23.8
Sample D Male 12.5
Entorhinal cortex
nTPM: 15.9
Samples: 4

Max nTPM: 20.7
Min nTPM: 12.6
Sample A Female 15.7
Sample B Female 20.7
Sample C Male 14.6
Sample D Male 12.6
Subiculum
nTPM: 15.6
Samples: 4

Max nTPM: 21.2
Min nTPM: 11.2
Sample A Female 21.2
Sample B Female 16.1
Sample C Male 11.2
Sample D Male 14.0
Ventral hippocampus
nTPM: 17.6
Samples: 4

Max nTPM: 20.7
Min nTPM: 11.7
Sample A Female 20.2
Sample B Female 11.7
Sample C Male 20.7
Sample D Male 17.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 86.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.1
Samples: 4

Max nTPM: 79.9
Min nTPM: 63.4
Sample A Male 73.6
Sample B Male 75.4
Sample C Female 79.9
Sample D Female 63.4
Hippocampal formation
nTPM: 86.0
Samples: 4

Max nTPM: 99.7
Min nTPM: 74.4
Sample A Male 99.7
Sample B Male 84.2
Sample C Female 85.6
Sample D Female 74.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
74635126 Antisense, RP_060215_03_D06, Mouse strain C57BL/6J (56 days, male) 0.0

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