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PDGFRA
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:11.9 nTPM
HPA:11.9 nTPM
GTEx:19.5 nTPM
FANTOM5:40.4 Scaled Tags Per Million
Pig:21.0 nTPM
Mouse:32.8 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB018143
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.9
Sample id Sample description nTPM
Hippocampus
nTPM: 10.9
1911 Female, age 85, right hemisphere 13.5
2529 Female, age 94, left hemisphere 13.3
1855 Male, age 76, left hemisphere 12.2
2621 Female, age 67, right hemisphere 12.1
1898 Male, age 80, left hemisphere 7.3
2148 Female, age 91, left hemisphere 7.1
Dentate gyrus
nTPM: 7.9
2528 Male, age 74, both hemispheres 10.8
2246 Female, age 85, both hemispheres 9.1
2530 Female, age 94, left hemisphere 8.6
2531 Female, age 67, both hemispheres 8.5
1927 Female, age 91, both hemispheres 5.9
2010 Male, age 76, both hemispheres 4.4
Entorhinal gyrus
nTPM: 10.6
2613 Female, age 94, left hemisphere 16.6
2686 Male, age 75, right hemisphere 13.2
1938 Female, age 85, left hemisphere 10.2
1787 Male, age 76, left hemisphere 9.4
2117 Female, age 91, right hemisphere 7.8
2764 Male, age 80, right hemisphere 6.4
Hippocampus, CA1
nTPM: 9.7
2527 Male, age 74, both hemispheres 14.7
2082 Female, age 91, right hemisphere 13.7
1873 Female, age 85, both hemispheres 7.9
2045 Male, age 76, both hemispheres 6.6
2749 Male, age 80, left hemisphere 5.6
Hippocampus, CA2
nTPM: 9.9
2437 Female, age 94, left hemisphere 17.9
2113 Female, age 91, right hemisphere 11.0
2249 Male, age 74, both hemispheres 10.6
1940 Female, age 85, left hemisphere 7.7
1892 Male, age 76, both hemispheres 6.4
1963 Male, age 80, left hemisphere 5.5
Hippocampus, CA3
nTPM: 7.3
2436 Male, age 74, both hemispheres 12.4
1891 Female, age 85, both hemispheres 10.6
2861 Female, age 67, both hemispheres 8.7
1867 Male, age 76, both hemispheres 5.3
2137 Male, age 80, left hemisphere 5.2
2620 Female, age 94, left hemisphere 1.4
Parahippocampal cortex
nTPM: 11.9
2250 Female, age 67, right hemisphere 17.3
2692 Male, age 74, both hemispheres 16.7
2693 Female, age 94, both hemispheres 15.5
1933 Female, age 85, both hemispheres 13.2
2622 Female, age 67, right hemisphere 12.7
2245 Female, age 91, both hemispheres 9.7
1850 Male, age 80, both hemispheres 9.6
2532 Female, age 72, left hemisphere 9.5
1990 Female, age 91, right hemisphere 8.0
2018 Male, age 76, both hemispheres 6.5
Perirhinal gyrus
nTPM: 9.7
2521 Female, age 94, right hemisphere 11.6
2848 Male, age 76, right hemisphere 11.5
1841 Female, age 85, right hemisphere 10.3
1847 Female, age 91, left hemisphere 9.1
1794 Male, age 80, right hemisphere 6.0
Subiculum
nTPM: 11.7
2438 Female, age 94, left hemisphere 18.4
2619 Male, age 74, both hemispheres 14.7
1977 Female, age 85, both hemispheres 10.1
2042 Male, age 76, both hemispheres 9.4
2729 Female, age 91, right hemisphere 8.9
1901 Male, age 80, both hemispheres 8.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.5
Samples: 197

Max nTPM: 50.6
Min nTPM: 1.9
Std nTPM: 10.1
Median nTPM: 17.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 50.6
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 50.0
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 48.6
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 48.3
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 47.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 40.8
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 38.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 38.2
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 38.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 38.0
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 37.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.4
FF:10153-102I9 76 years, female 48.3
FF:10169-103B7 60 years, female 32.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.4
Samples: 4

Max nTPM: 18.0
Min nTPM: 8.8
Sample A Female 16.8
Sample B Female 13.9
Sample C Male 18.0
Sample D Male 8.8
Entorhinal cortex
nTPM: 16.6
Samples: 4

Max nTPM: 21.5
Min nTPM: 14.2
Sample A Female 16.5
Sample B Female 14.2
Sample C Male 21.5
Sample D Male 14.3
Subiculum
nTPM: 21.0
Samples: 4

Max nTPM: 26.7
Min nTPM: 17.8
Sample A Female 26.7
Sample B Female 20.9
Sample C Male 18.6
Sample D Male 17.8
Ventral hippocampus
nTPM: 17.1
Samples: 4

Max nTPM: 21.0
Min nTPM: 15.3
Sample A Female 15.3
Sample B Female 16.4
Sample C Male 21.0
Sample D Male 15.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.8
Samples: 4

Max nTPM: 42.3
Min nTPM: 25.3
Sample A Male 31.1
Sample B Male 25.3
Sample C Female 32.5
Sample D Female 42.3
Hippocampal formation
nTPM: 24.3
Samples: 4

Max nTPM: 25.8
Min nTPM: 23.5
Sample A Male 23.5
Sample B Male 25.8
Sample C Female 23.9
Sample D Female 24.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
79354743 Antisense, RP_070208_04_B08, Mouse strain C57BL/6J (56 days, male) 2.5
77280309 Antisense, RP_070116_01_B01, Mouse strain C57BL/6J (56 days, male) 2.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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