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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:7.7 nTPM
HPA:7.7 nTPM
GTEx:15.9 nTPM
FANTOM5:14.4 Scaled Tags Per Million
Pig:212.9 nTPM
Mouse:17.9 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054891Antibody HPA057272
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 7.7
Sample id Sample description nTPM
Hippocampus
nTPM: 6.9
2148 Female, age 91, left hemisphere 7.7
1911 Female, age 85, right hemisphere 7.4
1855 Male, age 76, left hemisphere 6.6
1898 Male, age 80, left hemisphere 6.6
2621 Female, age 67, right hemisphere 6.6
2529 Female, age 94, left hemisphere 6.5
Dentate gyrus
nTPM: 6.9
1927 Female, age 91, both hemispheres 9.1
2531 Female, age 67, both hemispheres 7.8
2246 Female, age 85, both hemispheres 7.3
2528 Male, age 74, both hemispheres 6.8
2530 Female, age 94, left hemisphere 5.4
2010 Male, age 76, both hemispheres 5.2
Entorhinal gyrus
nTPM: 7.3
2613 Female, age 94, left hemisphere 8.8
2686 Male, age 75, right hemisphere 8.7
1938 Female, age 85, left hemisphere 8.5
1787 Male, age 76, left hemisphere 6.6
2117 Female, age 91, right hemisphere 5.7
2764 Male, age 80, right hemisphere 5.5
Hippocampus, CA1
nTPM: 7.1
1873 Female, age 85, both hemispheres 7.9
2527 Male, age 74, both hemispheres 7.3
2082 Female, age 91, right hemisphere 6.9
2045 Male, age 76, both hemispheres 6.6
2749 Male, age 80, left hemisphere 6.6
Hippocampus, CA2
nTPM: 6.6
1963 Male, age 80, left hemisphere 8.3
2113 Female, age 91, right hemisphere 7.3
1892 Male, age 76, both hemispheres 6.7
2249 Male, age 74, both hemispheres 6.0
1940 Female, age 85, left hemisphere 5.8
2437 Female, age 94, left hemisphere 5.6
Hippocampus, CA3
nTPM: 7.2
2861 Female, age 67, both hemispheres 8.2
2137 Male, age 80, left hemisphere 8.0
2620 Female, age 94, left hemisphere 8.0
1891 Female, age 85, both hemispheres 6.9
2436 Male, age 74, both hemispheres 5.9
1867 Male, age 76, both hemispheres 5.8
Parahippocampal cortex
nTPM: 7.6
2693 Female, age 94, both hemispheres 8.8
2622 Female, age 67, right hemisphere 8.4
2692 Male, age 74, both hemispheres 8.1
2245 Female, age 91, both hemispheres 7.9
2250 Female, age 67, right hemisphere 7.9
1850 Male, age 80, both hemispheres 7.8
1933 Female, age 85, both hemispheres 7.8
1990 Female, age 91, right hemisphere 6.8
2532 Female, age 72, left hemisphere 6.5
2018 Male, age 76, both hemispheres 5.7
Perirhinal gyrus
nTPM: 7.7
1847 Female, age 91, left hemisphere 8.4
1841 Female, age 85, right hemisphere 8.3
2848 Male, age 76, right hemisphere 8.3
2521 Female, age 94, right hemisphere 6.8
1794 Male, age 80, right hemisphere 6.7
Subiculum
nTPM: 5.9
2729 Female, age 91, right hemisphere 7.2
1977 Female, age 85, both hemispheres 6.6
2619 Male, age 74, both hemispheres 6.3
2438 Female, age 94, left hemisphere 6.2
1901 Male, age 80, both hemispheres 5.0
2042 Male, age 76, both hemispheres 4.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.9
Samples: 197

Max nTPM: 54.5
Min nTPM: 3.8
Std nTPM: 7.8
Median nTPM: 14.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 54.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 43.2
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 40.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 36.9
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 36.3
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 35.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 35.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 32.8
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 31.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 31.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 31.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.4
FF:10153-102I9 76 years, female 16.2
FF:10169-103B7 60 years, female 12.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 212.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 81.6
Samples: 4

Max nTPM: 84.7
Min nTPM: 78.9
Sample A Female 83.4
Sample B Female 84.7
Sample C Male 78.9
Sample D Male 79.3
Entorhinal cortex
nTPM: 212.9
Samples: 4

Max nTPM: 259.7
Min nTPM: 173.6
Sample A Female 193.8
Sample B Female 224.6
Sample C Male 259.7
Sample D Male 173.6
Subiculum
nTPM: 144.2
Samples: 4

Max nTPM: 217.1
Min nTPM: 109.1
Sample A Female 217.1
Sample B Female 141.2
Sample C Male 109.1
Sample D Male 109.2
Ventral hippocampus
nTPM: 88.6
Samples: 4

Max nTPM: 105.2
Min nTPM: 74.1
Sample A Female 74.1
Sample B Female 97.5
Sample C Male 105.2
Sample D Male 77.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 20.8
Min nTPM: 14.0
Sample A Male 18.7
Sample B Male 18.0
Sample C Female 20.8
Sample D Female 14.0
Hippocampal formation
nTPM: 16.1
Samples: 4

Max nTPM: 18.5
Min nTPM: 12.4
Sample A Male 18.5
Sample B Male 17.8
Sample C Female 12.4
Sample D Female 15.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.