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FBXO21
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:27.2 nTPM
HPA:27.2 nTPM
GTEx:20.4 nTPM
FANTOM5:111.9 Scaled Tags Per Million
Pig:31.7 nTPM
Mouse:74.1 nTPM
Allen mouse:18.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA071452
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.2
Sample id Sample description nTPM
Hippocampus
nTPM: 20.9
1898 Male, age 80, left hemisphere 29.2
1855 Male, age 76, left hemisphere 23.5
1911 Female, age 85, right hemisphere 20.0
2148 Female, age 91, left hemisphere 19.2
2621 Female, age 67, right hemisphere 18.1
2529 Female, age 94, left hemisphere 15.6
Dentate gyrus
nTPM: 22.1
2010 Male, age 76, both hemispheres 27.1
1927 Female, age 91, both hemispheres 26.4
2246 Female, age 85, both hemispheres 21.0
2530 Female, age 94, left hemisphere 21.0
2528 Male, age 74, both hemispheres 19.0
2531 Female, age 67, both hemispheres 18.1
Entorhinal gyrus
nTPM: 19.9
1938 Female, age 85, left hemisphere 22.9
2764 Male, age 80, right hemisphere 22.5
1787 Male, age 76, left hemisphere 20.9
2613 Female, age 94, left hemisphere 18.8
2117 Female, age 91, right hemisphere 17.9
2686 Male, age 75, right hemisphere 16.3
Hippocampus, CA1
nTPM: 27.2
2749 Male, age 80, left hemisphere 43.9
1873 Female, age 85, both hemispheres 27.0
2045 Male, age 76, both hemispheres 24.1
2082 Female, age 91, right hemisphere 20.8
2527 Male, age 74, both hemispheres 20.3
Hippocampus, CA2
nTPM: 22.3
1963 Male, age 80, left hemisphere 29.3
1892 Male, age 76, both hemispheres 26.6
2249 Male, age 74, both hemispheres 22.2
1940 Female, age 85, left hemisphere 20.0
2113 Female, age 91, right hemisphere 19.8
2437 Female, age 94, left hemisphere 16.1
Hippocampus, CA3
nTPM: 24.2
2137 Male, age 80, left hemisphere 39.5
2436 Male, age 74, both hemispheres 24.4
2620 Female, age 94, left hemisphere 23.8
1867 Male, age 76, both hemispheres 22.6
1891 Female, age 85, both hemispheres 19.4
2861 Female, age 67, both hemispheres 15.7
Parahippocampal cortex
nTPM: 19.5
1850 Male, age 80, both hemispheres 24.1
1990 Female, age 91, right hemisphere 21.4
1933 Female, age 85, both hemispheres 21.2
2250 Female, age 67, right hemisphere 20.0
2693 Female, age 94, both hemispheres 19.2
2245 Female, age 91, both hemispheres 19.1
2692 Male, age 74, both hemispheres 19.0
2018 Male, age 76, both hemispheres 17.3
2532 Female, age 72, left hemisphere 17.0
2622 Female, age 67, right hemisphere 16.9
Perirhinal gyrus
nTPM: 23.7
1847 Female, age 91, left hemisphere 26.2
1794 Male, age 80, right hemisphere 25.0
2521 Female, age 94, right hemisphere 24.2
1841 Female, age 85, right hemisphere 24.1
2848 Male, age 76, right hemisphere 19.0
Subiculum
nTPM: 20.1
1901 Male, age 80, both hemispheres 24.6
1977 Female, age 85, both hemispheres 22.9
2619 Male, age 74, both hemispheres 20.2
2042 Male, age 76, both hemispheres 18.6
2729 Female, age 91, right hemisphere 18.4
2438 Female, age 94, left hemisphere 15.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.4
Samples: 197

Max nTPM: 49.1
Min nTPM: 10.4
Std nTPM: 5.5
Median nTPM: 19.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 49.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 41.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 37.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 36.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 33.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 33.2
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 32.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 31.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 31.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 30.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 30.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 111.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 111.9
FF:10169-103B7 60 years, female 142.3
FF:10153-102I9 76 years, female 81.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.7
Samples: 4

Max nTPM: 36.1
Min nTPM: 25.7
Sample A Female 35.1
Sample B Female 36.1
Sample C Male 30.0
Sample D Male 25.7
Entorhinal cortex
nTPM: 26.3
Samples: 4

Max nTPM: 29.2
Min nTPM: 22.3
Sample A Female 25.5
Sample B Female 29.2
Sample C Male 28.0
Sample D Male 22.3
Subiculum
nTPM: 28.9
Samples: 4

Max nTPM: 33.6
Min nTPM: 23.7
Sample A Female 33.6
Sample B Female 28.5
Sample C Male 29.6
Sample D Male 23.7
Ventral hippocampus
nTPM: 31.6
Samples: 4

Max nTPM: 36.5
Min nTPM: 26.5
Sample A Female 32.0
Sample B Female 26.5
Sample C Male 36.5
Sample D Male 31.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 74.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 67.6
Samples: 4

Max nTPM: 77.8
Min nTPM: 62.7
Sample A Male 64.2
Sample B Male 62.7
Sample C Female 65.6
Sample D Female 77.8
Hippocampal formation
nTPM: 74.1
Samples: 4

Max nTPM: 80.9
Min nTPM: 68.6
Sample A Male 68.6
Sample B Male 77.8
Sample C Female 80.9
Sample D Female 69.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.0
587405 Antisense, RP_040831_01_D12, Mouse strain C57BL/6J (56 days, male) 19.3
70634119 Antisense, RP_050725_01_E03, Mouse strain C57BL/6J (56 days, male) 16.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.