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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:162.1 nTPM
HPA:162.1 nTPM
GTEx:187.3 nTPM
FANTOM5:10.8 Scaled Tags Per Million
Pig:180.3 nTPM
Mouse:315.2 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023474Antibody HPA075831
Glial cells MediumMedium
Neuronal cells LowHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 162.1
Sample id Sample description nTPM
Hippocampus
nTPM: 157.6
2621 Female, age 67, right hemisphere 291.3
2148 Female, age 91, left hemisphere 182.4
1911 Female, age 85, right hemisphere 157.6
2529 Female, age 94, left hemisphere 138.6
1898 Male, age 80, left hemisphere 92.1
1855 Male, age 76, left hemisphere 83.7
Dentate gyrus
nTPM: 123.5
1927 Female, age 91, both hemispheres 229.7
2531 Female, age 67, both hemispheres 214.4
2530 Female, age 94, left hemisphere 126.1
2528 Male, age 74, both hemispheres 61.8
2010 Male, age 76, both hemispheres 60.4
2246 Female, age 85, both hemispheres 48.2
Entorhinal gyrus
nTPM: 90.6
2613 Female, age 94, left hemisphere 222.3
2686 Male, age 75, right hemisphere 125.9
2764 Male, age 80, right hemisphere 70.1
1938 Female, age 85, left hemisphere 66.0
1787 Male, age 76, left hemisphere 43.7
2117 Female, age 91, right hemisphere 15.9
Hippocampus, CA1
nTPM: 140.7
2749 Male, age 80, left hemisphere 260.2
2527 Male, age 74, both hemispheres 179.0
1873 Female, age 85, both hemispheres 102.8
2045 Male, age 76, both hemispheres 87.3
2082 Female, age 91, right hemisphere 74.0
Hippocampus, CA2
nTPM: 95.7
1963 Male, age 80, left hemisphere 220.8
2113 Female, age 91, right hemisphere 111.8
1892 Male, age 76, both hemispheres 87.2
2249 Male, age 74, both hemispheres 71.1
2437 Female, age 94, left hemisphere 71.1
1940 Female, age 85, left hemisphere 12.3
Hippocampus, CA3
nTPM: 162.1
2861 Female, age 67, both hemispheres 299.9
2137 Male, age 80, left hemisphere 272.2
2620 Female, age 94, left hemisphere 252.5
1867 Male, age 76, both hemispheres 64.7
2436 Male, age 74, both hemispheres 47.7
1891 Female, age 85, both hemispheres 35.4
Parahippocampal cortex
nTPM: 72.5
2245 Female, age 91, both hemispheres 200.0
2622 Female, age 67, right hemisphere 123.1
2693 Female, age 94, both hemispheres 77.5
2250 Female, age 67, right hemisphere 73.9
1933 Female, age 85, both hemispheres 50.4
1990 Female, age 91, right hemisphere 46.4
2692 Male, age 74, both hemispheres 43.1
1850 Male, age 80, both hemispheres 40.9
2532 Female, age 72, left hemisphere 37.7
2018 Male, age 76, both hemispheres 32.6
Perirhinal gyrus
nTPM: 65.8
1847 Female, age 91, left hemisphere 115.9
2521 Female, age 94, right hemisphere 84.3
1794 Male, age 80, right hemisphere 56.9
2848 Male, age 76, right hemisphere 41.0
1841 Female, age 85, right hemisphere 31.0
Subiculum
nTPM: 38.6
1901 Male, age 80, both hemispheres 65.2
2729 Female, age 91, right hemisphere 62.8
2042 Male, age 76, both hemispheres 40.6
2619 Male, age 74, both hemispheres 28.9
1977 Female, age 85, both hemispheres 23.3
2438 Female, age 94, left hemisphere 11.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 187.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 187.3
Samples: 197

Max nTPM: 584.9
Min nTPM: 3.4
Std nTPM: 124.8
Median nTPM: 167.8
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 584.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 563.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 562.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 525.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 510.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 476.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 468.6
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 457.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 442.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 419.3
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 419.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.8
FF:10153-102I9 76 years, female 11.2
FF:10169-103B7 60 years, female 10.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 180.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 176.8
Samples: 4

Max nTPM: 212.1
Min nTPM: 135.0
Sample A Female 212.1
Sample B Female 200.6
Sample C Male 135.0
Sample D Male 159.5
Entorhinal cortex
nTPM: 180.3
Samples: 4

Max nTPM: 209.1
Min nTPM: 157.1
Sample A Female 190.0
Sample B Female 165.0
Sample C Male 209.1
Sample D Male 157.1
Subiculum
nTPM: 146.3
Samples: 4

Max nTPM: 199.3
Min nTPM: 109.0
Sample A Female 199.3
Sample B Female 130.6
Sample C Male 146.1
Sample D Male 109.0
Ventral hippocampus
nTPM: 169.0
Samples: 4

Max nTPM: 235.2
Min nTPM: 127.6
Sample A Female 127.6
Sample B Female 131.5
Sample C Male 181.7
Sample D Male 235.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 315.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 294.5
Samples: 4

Max nTPM: 305.7
Min nTPM: 283.0
Sample A Male 299.6
Sample B Male 289.7
Sample C Female 283.0
Sample D Female 305.7
Hippocampal formation
nTPM: 315.3
Samples: 4

Max nTPM: 327.0
Min nTPM: 300.0
Sample A Male 324.7
Sample B Male 327.0
Sample C Female 309.3
Sample D Female 300.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.