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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:205.6 nTPM
HPA:205.6 nTPM
GTEx:203.7 nTPM
FANTOM5:471.2 Scaled Tags Per Million
Pig:341.2 nTPM
Mouse:173.0 nTPM
Allen mouse:21.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018790Antibody HPA048800
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 205.6
Sample id Sample description nTPM
Hippocampus
nTPM: 100.8
2621 Female, age 67, right hemisphere 136.8
1898 Male, age 80, left hemisphere 134.8
2148 Female, age 91, left hemisphere 101.7
1855 Male, age 76, left hemisphere 81.5
2529 Female, age 94, left hemisphere 78.8
1911 Female, age 85, right hemisphere 71.4
Dentate gyrus
nTPM: 113.4
1927 Female, age 91, both hemispheres 147.2
2246 Female, age 85, both hemispheres 126.9
2530 Female, age 94, left hemisphere 125.9
2531 Female, age 67, both hemispheres 111.7
2528 Male, age 74, both hemispheres 94.7
2010 Male, age 76, both hemispheres 74.3
Entorhinal gyrus
nTPM: 174.7
2613 Female, age 94, left hemisphere 236.6
2764 Male, age 80, right hemisphere 222.2
1938 Female, age 85, left hemisphere 194.5
1787 Male, age 76, left hemisphere 178.4
2686 Male, age 75, right hemisphere 126.9
2117 Female, age 91, right hemisphere 89.5
Hippocampus, CA1
nTPM: 120.9
2749 Male, age 80, left hemisphere 228.0
2082 Female, age 91, right hemisphere 113.8
2527 Male, age 74, both hemispheres 98.6
1873 Female, age 85, both hemispheres 89.1
2045 Male, age 76, both hemispheres 74.9
Hippocampus, CA2
nTPM: 119.9
1892 Male, age 76, both hemispheres 159.3
1963 Male, age 80, left hemisphere 129.2
2437 Female, age 94, left hemisphere 119.0
1940 Female, age 85, left hemisphere 117.0
2113 Female, age 91, right hemisphere 100.6
2249 Male, age 74, both hemispheres 94.2
Hippocampus, CA3
nTPM: 129.2
2137 Male, age 80, left hemisphere 199.6
2620 Female, age 94, left hemisphere 197.6
2861 Female, age 67, both hemispheres 149.3
1867 Male, age 76, both hemispheres 92.2
1891 Female, age 85, both hemispheres 73.8
2436 Male, age 74, both hemispheres 62.4
Parahippocampal cortex
nTPM: 158.5
1850 Male, age 80, both hemispheres 200.0
2245 Female, age 91, both hemispheres 177.7
1990 Female, age 91, right hemisphere 170.1
2622 Female, age 67, right hemisphere 167.3
2693 Female, age 94, both hemispheres 163.9
2532 Female, age 72, left hemisphere 162.2
2250 Female, age 67, right hemisphere 159.3
1933 Female, age 85, both hemispheres 156.2
2692 Male, age 74, both hemispheres 145.0
2018 Male, age 76, both hemispheres 83.2
Perirhinal gyrus
nTPM: 205.6
1794 Male, age 80, right hemisphere 253.8
1847 Female, age 91, left hemisphere 231.5
1841 Female, age 85, right hemisphere 193.2
2848 Male, age 76, right hemisphere 185.1
2521 Female, age 94, right hemisphere 164.4
Subiculum
nTPM: 101.4
1977 Female, age 85, both hemispheres 157.6
1901 Male, age 80, both hemispheres 124.5
2619 Male, age 74, both hemispheres 121.9
2438 Female, age 94, left hemisphere 104.3
2042 Male, age 76, both hemispheres 53.8
2729 Female, age 91, right hemisphere 46.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 203.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 203.7
Samples: 197

Max nTPM: 412.4
Min nTPM: 19.1
Std nTPM: 71.4
Median nTPM: 197.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 412.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 381.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 376.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 373.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 371.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 362.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 358.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 348.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 345.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 343.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 343.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 471.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 471.2
FF:10169-103B7 60 years, female 529.4
FF:10153-102I9 76 years, female 412.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 341.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 328.3
Samples: 4

Max nTPM: 392.6
Min nTPM: 244.4
Sample A Female 387.3
Sample B Female 392.6
Sample C Male 288.9
Sample D Male 244.4
Entorhinal cortex
nTPM: 338.9
Samples: 4

Max nTPM: 392.0
Min nTPM: 304.7
Sample A Female 392.0
Sample B Female 322.7
Sample C Male 336.2
Sample D Male 304.7
Subiculum
nTPM: 295.6
Samples: 4

Max nTPM: 383.3
Min nTPM: 240.6
Sample A Female 383.3
Sample B Female 250.4
Sample C Male 308.2
Sample D Male 240.6
Ventral hippocampus
nTPM: 341.2
Samples: 4

Max nTPM: 429.6
Min nTPM: 223.9
Sample A Female 325.4
Sample B Female 223.9
Sample C Male 429.6
Sample D Male 385.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 173.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 173.0
Samples: 4

Max nTPM: 208.1
Min nTPM: 155.9
Sample A Male 161.1
Sample B Male 166.7
Sample C Female 155.9
Sample D Female 208.1
Hippocampal formation
nTPM: 148.6
Samples: 4

Max nTPM: 164.7
Min nTPM: 131.7
Sample A Male 131.7
Sample B Male 153.7
Sample C Female 164.7
Sample D Female 144.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.8
385775 Antisense, RP_040625_01_E03, Mouse strain C57BL/6J (56 days, male) 21.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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