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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:236.0 nTPM
HPA:236.0 nTPM
GTEx:149.4 nTPM
FANTOM5:490.0 Scaled Tags Per Million
Pig:158.4 nTPM
Mouse:29.4 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB025798
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 236.0
Sample id Sample description nTPM
Hippocampus
nTPM: 236.0
2529 Female, age 94, left hemisphere 278.4
1911 Female, age 85, right hemisphere 257.5
2148 Female, age 91, left hemisphere 247.2
1898 Male, age 80, left hemisphere 228.2
2621 Female, age 67, right hemisphere 203.0
1855 Male, age 76, left hemisphere 201.9
Dentate gyrus
nTPM: 218.5
2528 Male, age 74, both hemispheres 308.3
2530 Female, age 94, left hemisphere 217.1
2246 Female, age 85, both hemispheres 216.3
1927 Female, age 91, both hemispheres 205.3
2010 Male, age 76, both hemispheres 187.1
2531 Female, age 67, both hemispheres 177.1
Entorhinal gyrus
nTPM: 201.2
2117 Female, age 91, right hemisphere 283.6
1938 Female, age 85, left hemisphere 203.9
1787 Male, age 76, left hemisphere 197.4
2764 Male, age 80, right hemisphere 184.3
2686 Male, age 75, right hemisphere 171.0
2613 Female, age 94, left hemisphere 167.1
Hippocampus, CA1
nTPM: 218.2
2527 Male, age 74, both hemispheres 269.2
1873 Female, age 85, both hemispheres 236.6
2082 Female, age 91, right hemisphere 232.5
2045 Male, age 76, both hemispheres 181.3
2749 Male, age 80, left hemisphere 171.2
Hippocampus, CA2
nTPM: 231.0
2249 Male, age 74, both hemispheres 310.8
2113 Female, age 91, right hemisphere 244.8
1940 Female, age 85, left hemisphere 240.8
2437 Female, age 94, left hemisphere 216.9
1963 Male, age 80, left hemisphere 209.5
1892 Male, age 76, both hemispheres 163.0
Hippocampus, CA3
nTPM: 211.3
2436 Male, age 74, both hemispheres 247.1
2620 Female, age 94, left hemisphere 239.3
1891 Female, age 85, both hemispheres 236.9
2861 Female, age 67, both hemispheres 184.2
1867 Male, age 76, both hemispheres 182.1
2137 Male, age 80, left hemisphere 178.4
Parahippocampal cortex
nTPM: 195.4
2692 Male, age 74, both hemispheres 219.8
1990 Female, age 91, right hemisphere 208.0
2250 Female, age 67, right hemisphere 207.1
2245 Female, age 91, both hemispheres 203.3
1933 Female, age 85, both hemispheres 198.5
2018 Male, age 76, both hemispheres 194.9
2622 Female, age 67, right hemisphere 193.4
1850 Male, age 80, both hemispheres 186.9
2532 Female, age 72, left hemisphere 172.2
2693 Female, age 94, both hemispheres 170.3
Perirhinal gyrus
nTPM: 185.0
1794 Male, age 80, right hemisphere 195.2
1847 Female, age 91, left hemisphere 192.9
1841 Female, age 85, right hemisphere 191.4
2521 Female, age 94, right hemisphere 182.7
2848 Male, age 76, right hemisphere 162.7
Subiculum
nTPM: 226.2
2729 Female, age 91, right hemisphere 277.9
2619 Male, age 74, both hemispheres 270.2
2438 Female, age 94, left hemisphere 216.3
1977 Female, age 85, both hemispheres 199.6
2042 Male, age 76, both hemispheres 197.0
1901 Male, age 80, both hemispheres 196.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 149.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 149.4
Samples: 197

Max nTPM: 493.8
Min nTPM: 26.1
Std nTPM: 74.4
Median nTPM: 142.2
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 493.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 384.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 375.9
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 329.6
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 315.6
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 303.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 301.8
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 296.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 290.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 288.4
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 274.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 490.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 490.0
FF:10169-103B7 60 years, female 538.8
FF:10153-102I9 76 years, female 441.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 158.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 154.9
Samples: 4

Max nTPM: 198.2
Min nTPM: 108.8
Sample A Female 175.6
Sample B Female 137.1
Sample C Male 198.2
Sample D Male 108.8
Entorhinal cortex
nTPM: 79.5
Samples: 4

Max nTPM: 89.2
Min nTPM: 59.9
Sample A Female 85.1
Sample B Female 89.2
Sample C Male 83.6
Sample D Male 59.9
Subiculum
nTPM: 101.8
Samples: 4

Max nTPM: 112.2
Min nTPM: 80.9
Sample A Female 109.9
Sample B Female 112.2
Sample C Male 104.2
Sample D Male 80.9
Ventral hippocampus
nTPM: 158.4
Samples: 4

Max nTPM: 219.9
Min nTPM: 119.9
Sample A Female 162.5
Sample B Female 119.9
Sample C Male 219.9
Sample D Male 131.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.2
Samples: 4

Max nTPM: 38.3
Min nTPM: 15.2
Sample A Male 18.3
Sample B Male 15.2
Sample C Female 38.3
Sample D Female 32.9
Hippocampal formation
nTPM: 29.4
Samples: 4

Max nTPM: 36.9
Min nTPM: 23.1
Sample A Male 31.1
Sample B Male 23.1
Sample C Female 26.6
Sample D Female 36.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
88 Antisense, RP_040315_01_23, Mouse strain C57BL/6J (56 days, male) 0.9
87 Antisense, RP_040315_01_23, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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