ABOUTMENU
HELP
NEWS
COX5B
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:319.2 nTPM
HPA:319.2 nTPM
GTEx:402.9 nTPM
FANTOM5:415.3 Scaled Tags Per Million
Pig:137.8 nTPM
Mouse:198.0 nTPM
Allen mouse:7.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034517
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 319.2
Sample id Sample description nTPM
Hippocampus
nTPM: 310.6
1898 Male, age 80, left hemisphere 332.4
2529 Female, age 94, left hemisphere 321.4
2621 Female, age 67, right hemisphere 316.0
2148 Female, age 91, left hemisphere 303.1
1855 Male, age 76, left hemisphere 296.5
1911 Female, age 85, right hemisphere 294.3
Dentate gyrus
nTPM: 303.1
2010 Male, age 76, both hemispheres 311.3
2246 Female, age 85, both hemispheres 307.4
1927 Female, age 91, both hemispheres 307.3
2530 Female, age 94, left hemisphere 306.0
2528 Male, age 74, both hemispheres 304.9
2531 Female, age 67, both hemispheres 282.0
Entorhinal gyrus
nTPM: 302.8
2764 Male, age 80, right hemisphere 326.3
1787 Male, age 76, left hemisphere 309.2
2117 Female, age 91, right hemisphere 307.3
1938 Female, age 85, left hemisphere 306.9
2613 Female, age 94, left hemisphere 284.3
2686 Male, age 75, right hemisphere 282.8
Hippocampus, CA1
nTPM: 316.0
2749 Male, age 80, left hemisphere 365.5
2527 Male, age 74, both hemispheres 316.6
2082 Female, age 91, right hemisphere 307.3
1873 Female, age 85, both hemispheres 299.5
2045 Male, age 76, both hemispheres 291.3
Hippocampus, CA2
nTPM: 313.5
2249 Male, age 74, both hemispheres 341.5
1963 Male, age 80, left hemisphere 329.5
1892 Male, age 76, both hemispheres 317.2
2113 Female, age 91, right hemisphere 302.4
2437 Female, age 94, left hemisphere 300.6
1940 Female, age 85, left hemisphere 289.8
Hippocampus, CA3
nTPM: 310.7
2436 Male, age 74, both hemispheres 368.8
2137 Male, age 80, left hemisphere 315.7
1867 Male, age 76, both hemispheres 309.6
1891 Female, age 85, both hemispheres 302.4
2620 Female, age 94, left hemisphere 286.8
2861 Female, age 67, both hemispheres 281.3
Parahippocampal cortex
nTPM: 307.2
2250 Female, age 67, right hemisphere 329.6
1990 Female, age 91, right hemisphere 321.4
1933 Female, age 85, both hemispheres 315.2
2245 Female, age 91, both hemispheres 314.0
1850 Male, age 80, both hemispheres 311.4
2018 Male, age 76, both hemispheres 305.7
2532 Female, age 72, left hemisphere 304.6
2622 Female, age 67, right hemisphere 296.3
2693 Female, age 94, both hemispheres 287.4
2692 Male, age 74, both hemispheres 286.6
Perirhinal gyrus
nTPM: 319.2
1847 Female, age 91, left hemisphere 345.2
1794 Male, age 80, right hemisphere 331.3
1841 Female, age 85, right hemisphere 313.8
2521 Female, age 94, right hemisphere 313.5
2848 Male, age 76, right hemisphere 292.1
Subiculum
nTPM: 309.0
1977 Female, age 85, both hemispheres 330.3
2619 Male, age 74, both hemispheres 315.1
1901 Male, age 80, both hemispheres 312.7
2438 Female, age 94, left hemisphere 301.3
2729 Female, age 91, right hemisphere 299.5
2042 Male, age 76, both hemispheres 295.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 402.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 402.9
Samples: 197

Max nTPM: 1361.6
Min nTPM: 135.9
Std nTPM: 139.3
Median nTPM: 378.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1361.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 843.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 759.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 752.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 747.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 746.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 736.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 731.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 717.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 672.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 671.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 415.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 415.3
FF:10169-103B7 60 years, female 486.5
FF:10153-102I9 76 years, female 344.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 137.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 137.9
Samples: 4

Max nTPM: 189.0
Min nTPM: 84.8
Sample A Female 189.0
Sample B Female 121.1
Sample C Male 156.5
Sample D Male 84.8
Entorhinal cortex
nTPM: 132.9
Samples: 4

Max nTPM: 171.5
Min nTPM: 100.7
Sample A Female 131.0
Sample B Female 171.5
Sample C Male 128.2
Sample D Male 100.7
Subiculum
nTPM: 109.4
Samples: 4

Max nTPM: 150.7
Min nTPM: 91.4
Sample A Female 150.7
Sample B Female 100.6
Sample C Male 91.4
Sample D Male 95.0
Ventral hippocampus
nTPM: 125.6
Samples: 4

Max nTPM: 150.9
Min nTPM: 93.1
Sample A Female 150.9
Sample B Female 93.1
Sample C Male 142.8
Sample D Male 115.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 198.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 194.5
Samples: 4

Max nTPM: 210.3
Min nTPM: 182.7
Sample A Male 191.8
Sample B Male 210.3
Sample C Female 193.1
Sample D Female 182.7
Hippocampal formation
nTPM: 198.0
Samples: 4

Max nTPM: 222.4
Min nTPM: 179.0
Sample A Male 222.4
Sample B Male 194.4
Sample C Female 179.0
Sample D Female 196.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.9
74743435 Antisense, RP_060306_03_A10, Mouse strain C57BL/6J (56 days, male) 7.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.