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ARHGEF4
BASAL GANGLIA - Expression summary
Protein expression
Caudatei
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:56.8 nTPM
HPA:56.8 nTPM
GTEx:79.4 nTPM
FANTOM5:55.2 Scaled Tags Per Million

CAUDATE - Antibody stainingi
Antibody HPA018267
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 56.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 54.4
2289 Male, age 61, right hemisphere 73.7
2288 Male, age 75, left hemisphere 58.5
2290 Female, age 72, unknown 56.9
1854 Male, age 80, left hemisphere 54.9
1857 Female, age 85, left hemisphere 54.0
1781 Male, age 74, unknown 47.1
2481 Female, age 94, left hemisphere 45.9
2846 Female, age 79, unknown 44.6
Claustrum
nTPM: 50.4
2568 Male, age 61, both hemispheres 66.0
2645 Female, age 72, unknown 59.4
2284 Female, age 91, both hemispheres 56.8
2198 Male, age 80, both hemispheres 48.6
2491 Male, age 75, both hemispheres 48.3
2392 Female, age 94, both hemispheres 46.1
1956 Male, age 74, unknown 45.5
2196 Female, age 79, unknown 44.9
2292 Female, age 85, both hemispheres 38.4
Globus pallidus, externus
nTPM: 37.5
2646 Male, age 61, right hemisphere 49.7
2567 Female, age 72, unknown 40.9
2772 Female, age 79, unknown 34.5
1996 Male, age 80, right hemisphere 32.4
2395 Male, age 75, both hemispheres 29.9
Globus pallidus, internus
nTPM: 34.0
2483 Female, age 94, right hemisphere 40.1
2566 Female, age 72, unknown 35.0
2111 Female, age 85, right hemisphere 34.9
2778 Female, age 91, both hemispheres 33.7
2287 Male, age 75, right hemisphere 32.1
1818 Male, age 74, unknown 31.3
2037 Male, age 80, right hemisphere 31.0
Nucleus accumbens
nTPM: 48.6
2824 Male, age 61, right hemisphere 59.2
1783 Male, age 74, unknown 51.9
1806 Female, age 85, left hemisphere 50.2
1856 Female, age 91, right hemisphere 50.1
2286 Male, age 75, left hemisphere 49.8
2391 Female, age 94, left hemisphere 42.8
2732 Male, age 80, right hemisphere 42.3
2698 Female, age 72, unknown 42.1
Nucleus basalis of Meynert
nTPM: 49.8
2484 Female, age 94, left hemisphere 57.1
2569 Male, age 61, both hemispheres 53.1
2393 Male, age 80, right hemisphere 50.5
2821 Male, age 75, both hemispheres 38.3
Nucleus of the diagonal band
nTPM: 48.4
2029 Male, age 61, right hemisphere 54.6
2775 Male, age 80, right hemisphere 50.7
2195 Female, age 85, both hemispheres 48.4
1979 Male, age 74, unknown 45.0
1812 Female, age 91, both hemispheres 43.1
Olfactory tubercle
nTPM: 50.4
2487 Female, age 94, left hemisphere 55.9
2856 Male, age 75, right hemisphere 50.8
1846 Male, age 80, right hemisphere 48.4
1998 Female, age 91, both hemispheres 46.7
Putamen
nTPM: 56.8
2647 Male, age 75, left hemisphere 69.3
2489 Female, age 72, unknown 65.6
1838 Male, age 80, right hemisphere 58.8
1829 Male, age 74, unknown 54.0
1937 Female, age 91, right hemisphere 50.9
2466 Female, age 79, unknown 49.8
2482 Female, age 94, left hemisphere 49.0
Septal nuclei
nTPM: 45.8
1960 Male, age 74, unknown 51.4
2059 Female, age 85, both hemispheres 50.9
2031 Female, age 72, unknown 45.2
2629 Female, age 94, right hemisphere 44.7
2199 Male, age 80, right hemisphere 44.4
2394 Male, age 61, left hemisphere 44.2
2009 Female, age 91, both hemispheres 40.0

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 79.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 70.4
Samples: 246

Max nTPM: 127.5
Min nTPM: 29.3
Std nTPM: 17.5
Median nTPM: 68.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 127.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 121.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 117.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 114.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 112.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 111.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 110.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 110.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 105.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 105.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 104.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 79.4
Samples: 246

Max nTPM: 149.6
Min nTPM: 20.5
Std nTPM: 21.4
Median nTPM: 79.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 149.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 130.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 128.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 126.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 125.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 117.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 117.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 117.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 117.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 117.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 116.5
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Brain - Putamen (basal ganglia)
Average nTPM: 70.7
Samples: 205

Max nTPM: 133.7
Min nTPM: 13.1
Std nTPM: 18.0
Median nTPM: 69.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 133.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 123.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 123.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 116.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 109.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 108.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 107.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 106.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 104.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 103.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 103.3
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 55.2
FF:10164-103B2 76 years, female 55.2
Globus pallidus
Scaled Tags Per Million: 48.9
FF:10175-103C4 60 years, female 59.9
FF:10161-103A8 76 years, female 37.9
Nucleus accumbens
Scaled Tags Per Million: 45.3
FF:10037-101F1 23-56 years, mixed 45.3
Putamen
Scaled Tags Per Million: 46.4
FF:10176-103C5 60 years, female 46.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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