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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:12.9 nTPM
HPA:12.9 nTPM
GTEx:13.9 nTPM
FANTOM5:9.8 Scaled Tags Per Million
Pig:5.3 nTPM
Mouse:2.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019062Antibody HPA043230
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.9
Sample id Sample description nTPM
Hippocampus
nTPM: 12.1
1911 Female, age 85, right hemisphere 19.2
2529 Female, age 94, left hemisphere 11.5
1898 Male, age 80, left hemisphere 10.9
1855 Male, age 76, left hemisphere 10.8
2148 Female, age 91, left hemisphere 10.3
2621 Female, age 67, right hemisphere 9.8
Dentate gyrus
nTPM: 12.8
2010 Male, age 76, both hemispheres 15.4
2530 Female, age 94, left hemisphere 14.4
2528 Male, age 74, both hemispheres 13.7
2531 Female, age 67, both hemispheres 12.5
2246 Female, age 85, both hemispheres 11.1
1927 Female, age 91, both hemispheres 9.5
Entorhinal gyrus
nTPM: 11.4
2117 Female, age 91, right hemisphere 13.1
2764 Male, age 80, right hemisphere 13.1
2686 Male, age 75, right hemisphere 12.9
1787 Male, age 76, left hemisphere 10.4
2613 Female, age 94, left hemisphere 9.7
1938 Female, age 85, left hemisphere 9.4
Hippocampus, CA1
nTPM: 11.5
2082 Female, age 91, right hemisphere 13.1
2527 Male, age 74, both hemispheres 12.8
1873 Female, age 85, both hemispheres 10.8
2749 Male, age 80, left hemisphere 10.8
2045 Male, age 76, both hemispheres 10.0
Hippocampus, CA2
nTPM: 12.7
1963 Male, age 80, left hemisphere 15.7
1940 Female, age 85, left hemisphere 13.6
1892 Male, age 76, both hemispheres 13.0
2437 Female, age 94, left hemisphere 11.7
2113 Female, age 91, right hemisphere 11.2
2249 Male, age 74, both hemispheres 10.9
Hippocampus, CA3
nTPM: 11.1
1867 Male, age 76, both hemispheres 14.4
1891 Female, age 85, both hemispheres 13.1
2861 Female, age 67, both hemispheres 10.1
2137 Male, age 80, left hemisphere 9.8
2436 Male, age 74, both hemispheres 9.6
2620 Female, age 94, left hemisphere 9.4
Parahippocampal cortex
nTPM: 10.8
2692 Male, age 74, both hemispheres 13.2
2018 Male, age 76, both hemispheres 12.9
1933 Female, age 85, both hemispheres 12.3
1990 Female, age 91, right hemisphere 11.5
2532 Female, age 72, left hemisphere 10.5
1850 Male, age 80, both hemispheres 10.3
2245 Female, age 91, both hemispheres 10.1
2693 Female, age 94, both hemispheres 9.5
2622 Female, age 67, right hemisphere 9.1
2250 Female, age 67, right hemisphere 8.7
Perirhinal gyrus
nTPM: 9.5
1847 Female, age 91, left hemisphere 10.1
2521 Female, age 94, right hemisphere 9.9
1841 Female, age 85, right hemisphere 9.3
2848 Male, age 76, right hemisphere 9.3
1794 Male, age 80, right hemisphere 9.2
Subiculum
nTPM: 12.9
1901 Male, age 80, both hemispheres 14.9
2042 Male, age 76, both hemispheres 14.0
2438 Female, age 94, left hemisphere 13.0
2729 Female, age 91, right hemisphere 12.7
2619 Male, age 74, both hemispheres 11.6
1977 Female, age 85, both hemispheres 11.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.9
Samples: 197

Max nTPM: 50.5
Min nTPM: 2.4
Std nTPM: 7.8
Median nTPM: 12.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 50.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 45.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 42.4
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 41.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 35.0
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 32.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 32.5
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 31.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 30.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 30.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 30.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.8
FF:10153-102I9 76 years, female 13.5
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.5
Samples: 4

Max nTPM: 3.1
Min nTPM: 2.0
Sample A Female 3.1
Sample B Female 2.4
Sample C Male 2.5
Sample D Male 2.0
Entorhinal cortex
nTPM: 5.3
Samples: 4

Max nTPM: 7.2
Min nTPM: 3.8
Sample A Female 5.6
Sample B Female 7.2
Sample C Male 4.4
Sample D Male 3.8
Subiculum
nTPM: 2.1
Samples: 4

Max nTPM: 2.3
Min nTPM: 1.6
Sample A Female 2.1
Sample B Female 2.3
Sample C Male 1.6
Sample D Male 2.3
Ventral hippocampus
nTPM: 2.2
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.9
Sample A Female 2.2
Sample B Female 1.9
Sample C Male 2.4
Sample D Male 2.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.5
Samples: 4

Max nTPM: 1.7
Min nTPM: 1.2
Sample A Male 1.4
Sample B Male 1.2
Sample C Female 1.5
Sample D Female 1.7
Hippocampal formation
nTPM: 2.1
Samples: 4

Max nTPM: 2.3
Min nTPM: 1.9
Sample A Male 1.9
Sample B Male 2.3
Sample C Female 2.0
Sample D Female 2.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71763498 Antisense, RP_050921_02_A11, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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