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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		57.103
RNA expressioni
Consensus:28.4 nTPM
HPA:28.4 nTPM
GTEx:31.7 nTPM
FANTOM5:57.8 Scaled Tags Per Million
Pig:36.5 nTPM
Mouse:139.7 nTPM
Allen mouse:13.4 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA039536
Amygdala mean intensity 57.103
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 14.893
Basal medial amygdaloid nucleus 42.712
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 43.182
Cortical amygdala 33.701
Central amygdala 57.103
Medial amygdaloid nucleus 34.621

AMYGDALA - HPA Brain RNA-seq
Max nTPM 28.4
Sample id Sample description nTPM
Amygdala
nTPM: 26.8
2814 Male, age 76, right hemisphere 33.8
2514 Male, age 75, right hemisphere 26.1
2517 Female, age 94, left hemisphere 25.9
1987 Female, age 91, left hemisphere 24.2
2695 Female, age 67, right hemisphere 24.1
Basal amygdala
nTPM: 23.8
1955 Male, age 76, both hemispheres 28.0
2609 Male, age 75, right hemisphere 26.0
2110 Male, age 80, left hemisphere 23.8
2243 Female, age 91, right hemisphere 23.2
2685 Female, age 94, left hemisphere 21.9
2827 Female, age 67, right hemisphere 20.0
Central amygdala
nTPM: 25.4
1905 Male, age 76, both hemispheres 33.7
2515 Male, age 75, right hemisphere 24.7
2239 Male, age 80, left hemisphere 24.6
2701 Female, age 91, right hemisphere 22.2
2826 Female, age 94, left hemisphere 21.9
Corticomedial amygdala
nTPM: 25.7
2429 Female, age 94, left hemisphere 29.1
2240 Male, age 76, both hemispheres 28.5
2428 Male, age 75, right hemisphere 28.0
2829 Male, age 80, left hemisphere 24.9
2242 Female, age 91, right hemisphere 23.8
2535 Female, age 67, right hemisphere 19.9
Lateral amygdala
nTPM: 24.7
1883 Male, age 76, both hemispheres 32.0
2516 Male, age 75, right hemisphere 29.7
2534 Female, age 94, left hemisphere 23.2
2255 Female, age 91, right hemisphere 22.1
2830 Female, age 67, right hemisphere 20.9
2256 Male, age 80, left hemisphere 20.3
Stria terminalis, bed nucleus
nTPM: 28.4
1974 Female, age 91, both hemispheres 31.2
2486 Female, age 94, both hemispheres 29.3
2201 Male, age 74, unknown 24.6

AMYGDALA - GTEx RNA-seqi
Average nTPM 31.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 31.7
Samples: 152

Max nTPM: 73.8
Min nTPM: 14.5
Std nTPM: 8.3
Median nTPM: 30.7
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 73.8
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 57.9
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 55.5
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 49.0
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 47.6
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 46.8
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 45.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 45.3
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 43.4
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 43.3
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 42.9
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 57.8
FF:10151-102I7 76 years, female 57.8

AMYGDALA - Pig RNA-seqi
Average nTPM 36.5
Pig sample Sample description nTPM
Amygdala
nTPM: 36.5
Samples: 4

Max nTPM: 49.5
Min nTPM: 28.9
Sample A Female 49.5
Sample B Female 34.1
Sample C Male 28.9
Sample D Male 33.5

AMYGDALA - Mouse RNA-seqi
Average nTPM 139.7
Mouse sample Sample description nTPM
Amygdala
nTPM: 139.8
Samples: 4

Max nTPM: 150.2
Min nTPM: 135.8
Sample A Male 150.2
Sample B Male 135.8
Sample C Female 137.1
Sample D Female 135.9

AMYGDALA - Allen Mouse ISHi
Max Expression energy 13.4
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 13.4
69887439 Antisense, RP_050512_03_F11, Mouse strain C57BL/6J (56 days, male) 13.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.