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PHF11
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:16.4 nTPM
HPA:16.4 nTPM
GTEx:18.0 nTPM
FANTOM5:30.2 Scaled Tags Per Million
Pig:12.2 nTPM
Mouse:0.6 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.4
Sample id Sample description nTPM
Hippocampus
nTPM: 15.9
1911 Female, age 85, right hemisphere 16.5
2621 Female, age 67, right hemisphere 16.2
2529 Female, age 94, left hemisphere 16.1
1855 Male, age 76, left hemisphere 16.0
2148 Female, age 91, left hemisphere 15.4
1898 Male, age 80, left hemisphere 15.2
Dentate gyrus
nTPM: 15.3
2010 Male, age 76, both hemispheres 16.8
2246 Female, age 85, both hemispheres 15.5
2530 Female, age 94, left hemisphere 15.5
2528 Male, age 74, both hemispheres 15.3
1927 Female, age 91, both hemispheres 14.5
2531 Female, age 67, both hemispheres 14.3
Entorhinal gyrus
nTPM: 15.3
2117 Female, age 91, right hemisphere 16.9
2686 Male, age 75, right hemisphere 15.5
1787 Male, age 76, left hemisphere 15.1
1938 Female, age 85, left hemisphere 15.1
2613 Female, age 94, left hemisphere 14.8
2764 Male, age 80, right hemisphere 14.7
Hippocampus, CA1
nTPM: 15.5
2045 Male, age 76, both hemispheres 16.3
2082 Female, age 91, right hemisphere 16.0
2527 Male, age 74, both hemispheres 16.0
1873 Female, age 85, both hemispheres 15.5
2749 Male, age 80, left hemisphere 13.9
Hippocampus, CA2
nTPM: 16.1
1940 Female, age 85, left hemisphere 16.7
2249 Male, age 74, both hemispheres 16.4
2437 Female, age 94, left hemisphere 16.4
2113 Female, age 91, right hemisphere 16.0
1892 Male, age 76, both hemispheres 15.5
1963 Male, age 80, left hemisphere 15.5
Hippocampus, CA3
nTPM: 15.4
2436 Male, age 74, both hemispheres 16.8
1867 Male, age 76, both hemispheres 16.6
1891 Female, age 85, both hemispheres 16.5
2861 Female, age 67, both hemispheres 14.3
2620 Female, age 94, left hemisphere 14.2
2137 Male, age 80, left hemisphere 14.1
Parahippocampal cortex
nTPM: 15.6
2018 Male, age 76, both hemispheres 17.8
2693 Female, age 94, both hemispheres 16.1
2692 Male, age 74, both hemispheres 16.0
2250 Female, age 67, right hemisphere 15.9
2532 Female, age 72, left hemisphere 15.8
1990 Female, age 91, right hemisphere 15.7
2622 Female, age 67, right hemisphere 15.2
2245 Female, age 91, both hemispheres 14.9
1850 Male, age 80, both hemispheres 14.7
1933 Female, age 85, both hemispheres 14.0
Perirhinal gyrus
nTPM: 15.4
2848 Male, age 76, right hemisphere 16.3
2521 Female, age 94, right hemisphere 15.8
1794 Male, age 80, right hemisphere 15.4
1841 Female, age 85, right hemisphere 15.1
1847 Female, age 91, left hemisphere 14.4
Subiculum
nTPM: 16.4
2042 Male, age 76, both hemispheres 17.2
2729 Female, age 91, right hemisphere 16.9
2619 Male, age 74, both hemispheres 16.7
2438 Female, age 94, left hemisphere 16.6
1901 Male, age 80, both hemispheres 15.9
1977 Female, age 85, both hemispheres 15.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.0
Samples: 197

Max nTPM: 50.3
Min nTPM: 7.9
Std nTPM: 5.4
Median nTPM: 17.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 50.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 41.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 32.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 31.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 31.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 28.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 28.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 27.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 27.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 27.2
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 27.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.2
FF:10153-102I9 76 years, female 34.3
FF:10169-103B7 60 years, female 26.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.2
Samples: 4

Max nTPM: 17.0
Min nTPM: 8.4
Sample A Female 17.0
Sample B Female 8.4
Sample C Male 11.8
Sample D Male 11.6
Entorhinal cortex
nTPM: 10.3
Samples: 4

Max nTPM: 14.9
Min nTPM: 7.7
Sample A Female 14.9
Sample B Female 7.7
Sample C Male 9.3
Sample D Male 9.1
Subiculum
nTPM: 11.1
Samples: 4

Max nTPM: 14.9
Min nTPM: 8.1
Sample A Female 14.9
Sample B Female 8.1
Sample C Male 9.6
Sample D Male 11.9
Ventral hippocampus
nTPM: 11.5
Samples: 4

Max nTPM: 15.0
Min nTPM: 8.3
Sample A Female 12.5
Sample B Female 8.3
Sample C Male 10.1
Sample D Male 15.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.5
Samples: 4

Max nTPM: 0.8
Min nTPM: 0.0
Sample A Male 0.8
Sample B Male 0.6
Sample C Female 0.6
Sample D Female 0.0
Hippocampal formation
nTPM: 0.6
Samples: 4

Max nTPM: 0.8
Min nTPM: 0.3
Sample A Male 0.8
Sample B Male 0.5
Sample C Female 0.3
Sample D Female 0.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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