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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:34.7 nTPM
HPA:34.7 nTPM
GTEx:37.6 nTPM
FANTOM5:67.5 Scaled Tags Per Million
Pig:12.7 nTPM
Mouse:43.6 nTPM
Allen mouse:0.3 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 34.7
Sample id Sample description nTPM
Amygdala
nTPM: 34.7
2814 Male, age 76, right hemisphere 49.2
2514 Male, age 75, right hemisphere 41.8
2695 Female, age 67, right hemisphere 31.5
1987 Female, age 91, left hemisphere 28.2
2517 Female, age 94, left hemisphere 22.8
Basal amygdala
nTPM: 29.8
2609 Male, age 75, right hemisphere 44.5
1955 Male, age 76, both hemispheres 35.5
2243 Female, age 91, right hemisphere 35.5
2110 Male, age 80, left hemisphere 35.2
2685 Female, age 94, left hemisphere 17.7
2827 Female, age 67, right hemisphere 10.2
Central amygdala
nTPM: 29.8
1905 Male, age 76, both hemispheres 48.7
2515 Male, age 75, right hemisphere 29.8
2239 Male, age 80, left hemisphere 28.2
2701 Female, age 91, right hemisphere 24.7
2826 Female, age 94, left hemisphere 17.5
Corticomedial amygdala
nTPM: 31.4
2428 Male, age 75, right hemisphere 44.0
2829 Male, age 80, left hemisphere 41.6
2242 Female, age 91, right hemisphere 36.1
2240 Male, age 76, both hemispheres 27.0
2429 Female, age 94, left hemisphere 26.1
2535 Female, age 67, right hemisphere 13.8
Lateral amygdala
nTPM: 26.6
2516 Male, age 75, right hemisphere 41.8
1883 Male, age 76, both hemispheres 41.6
2255 Female, age 91, right hemisphere 23.1
2256 Male, age 80, left hemisphere 22.1
2534 Female, age 94, left hemisphere 20.6
2830 Female, age 67, right hemisphere 10.4
Stria terminalis, bed nucleus
nTPM: 26.4
2201 Male, age 74, unknown 35.2
2486 Female, age 94, both hemispheres 23.4
1974 Female, age 91, both hemispheres 20.6

AMYGDALA - GTEx RNA-seqi
Average nTPM 37.6
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 37.6
Samples: 152

Max nTPM: 102.0
Min nTPM: 2.8
Std nTPM: 22.1
Median nTPM: 33.4
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 102.0
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 94.5
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 94.0
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 93.0
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 84.3
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 84.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 82.8
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 81.5
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 80.2
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 79.9
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 79.5
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 67.5
FF:10151-102I7 76 years, female 67.5

AMYGDALA - Pig RNA-seqi
Average nTPM 12.7
Pig sample Sample description nTPM
Amygdala
nTPM: 12.7
Samples: 4

Max nTPM: 16.3
Min nTPM: 10.0
Sample A Female 16.3
Sample B Female 10.0
Sample C Male 12.9
Sample D Male 11.5

AMYGDALA - Mouse RNA-seqi
Average nTPM 43.6
Mouse sample Sample description nTPM
Amygdala
nTPM: 43.6
Samples: 4

Max nTPM: 46.9
Min nTPM: 41.0
Sample A Male 46.9
Sample B Male 41.0
Sample C Female 42.7
Sample D Female 43.8

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.3
70431307 Antisense, RP_050614_02_E11, Mouse strain C57BL/6J (56 days, male) 0.4
74750017 Antisense, RP_060220_05_E07, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.