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TEX2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:37.6 nTPM
HPA:37.6 nTPM
GTEx:31.1 nTPM
FANTOM5:38.8 Scaled Tags Per Million
Pig:57.4 nTPM
Mouse:61.2 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020648
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.6
Sample id Sample description nTPM
Hippocampus
nTPM: 34.0
1898 Male, age 80, left hemisphere 38.7
1911 Female, age 85, right hemisphere 35.5
1855 Male, age 76, left hemisphere 33.5
2621 Female, age 67, right hemisphere 33.1
2529 Female, age 94, left hemisphere 33.0
2148 Female, age 91, left hemisphere 30.1
Dentate gyrus
nTPM: 31.8
2530 Female, age 94, left hemisphere 34.5
2246 Female, age 85, both hemispheres 33.6
2010 Male, age 76, both hemispheres 32.8
1927 Female, age 91, both hemispheres 31.8
2528 Male, age 74, both hemispheres 30.1
2531 Female, age 67, both hemispheres 28.1
Entorhinal gyrus
nTPM: 35.7
2764 Male, age 80, right hemisphere 38.7
2117 Female, age 91, right hemisphere 38.6
1938 Female, age 85, left hemisphere 35.3
2686 Male, age 75, right hemisphere 35.2
2613 Female, age 94, left hemisphere 34.1
1787 Male, age 76, left hemisphere 32.6
Hippocampus, CA1
nTPM: 37.6
2749 Male, age 80, left hemisphere 57.7
2527 Male, age 74, both hemispheres 36.5
1873 Female, age 85, both hemispheres 35.8
2082 Female, age 91, right hemisphere 31.9
2045 Male, age 76, both hemispheres 26.1
Hippocampus, CA2
nTPM: 33.3
1963 Male, age 80, left hemisphere 40.3
2249 Male, age 74, both hemispheres 35.1
1892 Male, age 76, both hemispheres 33.1
2113 Female, age 91, right hemisphere 31.3
1940 Female, age 85, left hemisphere 30.1
2437 Female, age 94, left hemisphere 29.7
Hippocampus, CA3
nTPM: 35.7
2137 Male, age 80, left hemisphere 59.1
1891 Female, age 85, both hemispheres 34.3
2436 Male, age 74, both hemispheres 34.1
1867 Male, age 76, both hemispheres 31.9
2620 Female, age 94, left hemisphere 27.8
2861 Female, age 67, both hemispheres 27.2
Parahippocampal cortex
nTPM: 33.4
1850 Male, age 80, both hemispheres 39.1
2532 Female, age 72, left hemisphere 35.5
2692 Male, age 74, both hemispheres 33.9
1933 Female, age 85, both hemispheres 33.6
1990 Female, age 91, right hemisphere 33.0
2245 Female, age 91, both hemispheres 33.0
2622 Female, age 67, right hemisphere 32.7
2250 Female, age 67, right hemisphere 31.5
2018 Male, age 76, both hemispheres 31.4
2693 Female, age 94, both hemispheres 29.6
Perirhinal gyrus
nTPM: 33.4
1794 Male, age 80, right hemisphere 37.0
1841 Female, age 85, right hemisphere 34.8
1847 Female, age 91, left hemisphere 33.2
2848 Male, age 76, right hemisphere 32.7
2521 Female, age 94, right hemisphere 29.0
Subiculum
nTPM: 37.3
1901 Male, age 80, both hemispheres 46.0
2438 Female, age 94, left hemisphere 38.5
2042 Male, age 76, both hemispheres 38.3
1977 Female, age 85, both hemispheres 38.0
2619 Male, age 74, both hemispheres 32.8
2729 Female, age 91, right hemisphere 29.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.1
Samples: 197

Max nTPM: 52.1
Min nTPM: 11.2
Std nTPM: 6.4
Median nTPM: 30.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 52.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 51.0
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 50.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 50.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 49.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 49.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 47.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 43.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 42.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 42.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 42.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.8
FF:10153-102I9 76 years, female 44.2
FF:10169-103B7 60 years, female 33.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 57.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 57.4
Samples: 4

Max nTPM: 78.3
Min nTPM: 40.8
Sample A Female 78.3
Sample B Female 57.5
Sample C Male 53.0
Sample D Male 40.8
Entorhinal cortex
nTPM: 52.9
Samples: 4

Max nTPM: 58.7
Min nTPM: 47.4
Sample A Female 58.7
Sample B Female 49.4
Sample C Male 56.2
Sample D Male 47.4
Subiculum
nTPM: 45.0
Samples: 4

Max nTPM: 56.5
Min nTPM: 39.1
Sample A Female 56.5
Sample B Female 40.4
Sample C Male 43.8
Sample D Male 39.1
Ventral hippocampus
nTPM: 49.4
Samples: 4

Max nTPM: 57.3
Min nTPM: 37.8
Sample A Female 49.0
Sample B Female 37.8
Sample C Male 53.3
Sample D Male 57.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 61.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.9
Samples: 4

Max nTPM: 56.7
Min nTPM: 48.0
Sample A Male 48.0
Sample B Male 48.5
Sample C Female 50.3
Sample D Female 56.7
Hippocampal formation
nTPM: 61.2
Samples: 4

Max nTPM: 68.3
Min nTPM: 56.9
Sample A Male 57.8
Sample B Male 61.7
Sample C Female 68.3
Sample D Female 56.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
68798729 Antisense, RP_050217_01_B06, Mouse strain C57BL/6J (56 days, male) 3.8

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The Human Protein Atlas

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