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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:19.6 nTPM
HPA:19.6 nTPM
GTEx:32.5 nTPM
FANTOM5:73.5 Scaled Tags Per Million
Pig:45.9 nTPM
Mouse:63.6 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063597Antibody CAB011692
Glial cells MediumHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.6
Sample id Sample description nTPM
Hippocampus
nTPM: 19.2
2529 Female, age 94, left hemisphere 28.1
1898 Male, age 80, left hemisphere 20.4
2148 Female, age 91, left hemisphere 18.1
2621 Female, age 67, right hemisphere 17.2
1855 Male, age 76, left hemisphere 16.0
1911 Female, age 85, right hemisphere 15.3
Dentate gyrus
nTPM: 17.4
2010 Male, age 76, both hemispheres 21.4
2246 Female, age 85, both hemispheres 18.4
1927 Female, age 91, both hemispheres 17.4
2530 Female, age 94, left hemisphere 17.4
2531 Female, age 67, both hemispheres 15.3
2528 Male, age 74, both hemispheres 14.6
Entorhinal gyrus
nTPM: 19.4
2117 Female, age 91, right hemisphere 22.7
2686 Male, age 75, right hemisphere 20.7
1787 Male, age 76, left hemisphere 20.4
2764 Male, age 80, right hemisphere 20.0
1938 Female, age 85, left hemisphere 17.9
2613 Female, age 94, left hemisphere 14.9
Hippocampus, CA1
nTPM: 18.4
2045 Male, age 76, both hemispheres 20.6
2749 Male, age 80, left hemisphere 19.1
2527 Male, age 74, both hemispheres 18.3
1873 Female, age 85, both hemispheres 18.1
2082 Female, age 91, right hemisphere 15.9
Hippocampus, CA2
nTPM: 17.3
1892 Male, age 76, both hemispheres 20.4
2437 Female, age 94, left hemisphere 19.9
1940 Female, age 85, left hemisphere 16.5
2249 Male, age 74, both hemispheres 16.5
2113 Female, age 91, right hemisphere 16.0
1963 Male, age 80, left hemisphere 14.7
Hippocampus, CA3
nTPM: 17.5
2620 Female, age 94, left hemisphere 19.5
1867 Male, age 76, both hemispheres 19.0
1891 Female, age 85, both hemispheres 18.5
2436 Male, age 74, both hemispheres 17.6
2861 Female, age 67, both hemispheres 15.2
2137 Male, age 80, left hemisphere 15.0
Parahippocampal cortex
nTPM: 17.1
2018 Male, age 76, both hemispheres 21.7
2532 Female, age 72, left hemisphere 18.5
2245 Female, age 91, both hemispheres 18.3
2250 Female, age 67, right hemisphere 17.4
1990 Female, age 91, right hemisphere 16.5
1850 Male, age 80, both hemispheres 16.3
1933 Female, age 85, both hemispheres 16.2
2692 Male, age 74, both hemispheres 15.4
2693 Female, age 94, both hemispheres 15.4
2622 Female, age 67, right hemisphere 15.0
Perirhinal gyrus
nTPM: 17.8
1794 Male, age 80, right hemisphere 21.5
2848 Male, age 76, right hemisphere 18.6
1847 Female, age 91, left hemisphere 16.6
1841 Female, age 85, right hemisphere 16.3
2521 Female, age 94, right hemisphere 15.7
Subiculum
nTPM: 19.6
2042 Male, age 76, both hemispheres 27.5
2438 Female, age 94, left hemisphere 23.2
2619 Male, age 74, both hemispheres 17.7
1977 Female, age 85, both hemispheres 17.6
1901 Male, age 80, both hemispheres 17.0
2729 Female, age 91, right hemisphere 14.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.5
Samples: 197

Max nTPM: 113.5
Min nTPM: 13.7
Std nTPM: 10.4
Median nTPM: 31.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 113.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 78.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 70.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 63.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 59.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 52.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 51.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 49.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 48.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 47.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 46.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 73.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 73.5
FF:10169-103B7 60 years, female 76.3
FF:10153-102I9 76 years, female 70.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 45.9
Samples: 4

Max nTPM: 53.5
Min nTPM: 37.8
Sample A Female 53.5
Sample B Female 44.8
Sample C Male 47.5
Sample D Male 37.8
Entorhinal cortex
nTPM: 41.2
Samples: 4

Max nTPM: 47.2
Min nTPM: 34.6
Sample A Female 41.8
Sample B Female 47.2
Sample C Male 41.0
Sample D Male 34.6
Subiculum
nTPM: 42.8
Samples: 4

Max nTPM: 50.6
Min nTPM: 39.3
Sample A Female 50.6
Sample B Female 39.3
Sample C Male 40.6
Sample D Male 40.6
Ventral hippocampus
nTPM: 41.6
Samples: 4

Max nTPM: 44.9
Min nTPM: 39.5
Sample A Female 44.9
Sample B Female 39.5
Sample C Male 40.6
Sample D Male 41.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 53.8
Samples: 4

Max nTPM: 57.7
Min nTPM: 50.6
Sample A Male 57.7
Sample B Male 54.5
Sample C Female 52.3
Sample D Female 50.6
Hippocampal formation
nTPM: 63.6
Samples: 4

Max nTPM: 70.7
Min nTPM: 57.9
Sample A Male 70.7
Sample B Male 64.7
Sample C Female 60.9
Sample D Female 57.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
75860985 Antisense, RP_060601_03_A02, Mouse strain C57BL/6J (56 days, male) 0.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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