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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		25.906
RNA expressioni
Consensus:9.2 nTPM
HPA:9.2 nTPM
GTEx:7.4 nTPM
FANTOM5:74.3 Scaled Tags Per Million
Pig:15.2 nTPM
Mouse:44.6 nTPM
Allen mouse:7.1 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA051256
Amygdala mean intensity 25.906
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 1.758
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 1.966
Cortical amygdala 25.906
Central amygdala 2.107
Medial amygdaloid nucleus 2.960

AMYGDALA - HPA Brain RNA-seq
Max nTPM 9.2
Sample id Sample description nTPM
Amygdala
nTPM: 0.0
1987 Female, age 91, left hemisphere 0.0
2514 Male, age 75, right hemisphere 0.0
2517 Female, age 94, left hemisphere 0.0
2695 Female, age 67, right hemisphere 0.0
2814 Male, age 76, right hemisphere 0.0
Basal amygdala
nTPM: 0.0
1955 Male, age 76, both hemispheres 0.0
2110 Male, age 80, left hemisphere 0.0
2243 Female, age 91, right hemisphere 0.0
2609 Male, age 75, right hemisphere 0.0
2685 Female, age 94, left hemisphere 0.0
2827 Female, age 67, right hemisphere 0.0
Central amygdala
nTPM: 0.0
1905 Male, age 76, both hemispheres 0.0
2239 Male, age 80, left hemisphere 0.0
2515 Male, age 75, right hemisphere 0.0
2701 Female, age 91, right hemisphere 0.0
2826 Female, age 94, left hemisphere 0.0
Corticomedial amygdala
nTPM: 0.1
2535 Female, age 67, right hemisphere 0.6
2240 Male, age 76, both hemispheres 0.0
2242 Female, age 91, right hemisphere 0.0
2428 Male, age 75, right hemisphere 0.0
2429 Female, age 94, left hemisphere 0.0
2829 Male, age 80, left hemisphere 0.0
Lateral amygdala
nTPM: 0.0
1883 Male, age 76, both hemispheres 0.0
2255 Female, age 91, right hemisphere 0.0
2256 Male, age 80, left hemisphere 0.0
2516 Male, age 75, right hemisphere 0.0
2534 Female, age 94, left hemisphere 0.0
2830 Female, age 67, right hemisphere 0.0
Stria terminalis, bed nucleus
nTPM: 9.2
1974 Female, age 91, both hemispheres 17.8
2486 Female, age 94, both hemispheres 9.9
2201 Male, age 74, unknown 0.0

AMYGDALA - GTEx RNA-seqi
Average nTPM 7.4
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 7.4
Samples: 152

Max nTPM: 46.2
Min nTPM: 0.2
Std nTPM: 6.0
Median nTPM: 6.1
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 46.2
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 29.0
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 24.9
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 24.2
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 21.5
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 20.9
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 19.3
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 19.1
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 18.9
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 16.1
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 15.6
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 74.3
FF:10151-102I7 76 years, female 74.3

AMYGDALA - Pig RNA-seqi
Average nTPM 15.2
Pig sample Sample description nTPM
Amygdala
nTPM: 15.2
Samples: 4

Max nTPM: 21.7
Min nTPM: 11.3
Sample A Female 21.7
Sample B Female 11.3
Sample C Male 14.7
Sample D Male 13.1

AMYGDALA - Mouse RNA-seqi
Average nTPM 44.6
Mouse sample Sample description nTPM
Amygdala
nTPM: 44.6
Samples: 4

Max nTPM: 56.2
Min nTPM: 39.3
Sample A Male 39.3
Sample B Male 41.1
Sample C Female 56.2
Sample D Female 41.7

AMYGDALA - Allen Mouse ISHi
Max Expression energy 7.1
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 7.1
77455019 Antisense, RP_070129_02_A02, Mouse strain C57BL/6J (56 days, male) 12.5
79591351 Antisense, RP_071204_02_G03, Mouse strain C57BL/6J (56 days, male) 8.3
1041 Antisense, RP_Baylor_103060, Mouse strain C57BL/6J (56 days, male) 0.6
1042 Antisense, RP_Baylor_103060, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.