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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:208.7 nTPM
HPA:208.7 nTPM
GTEx:223.0 nTPM
FANTOM5:269.3 Scaled Tags Per Million
Pig:153.8 nTPM
Mouse:53.5 nTPM
Allen mouse:5.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038295Antibody HPA038296
Glial cells MediumLow
Neuronal cells LowNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 208.7
Sample id Sample description nTPM
Hippocampus
nTPM: 176.8
2529 Female, age 94, left hemisphere 200.5
1911 Female, age 85, right hemisphere 196.0
2621 Female, age 67, right hemisphere 183.5
1898 Male, age 80, left hemisphere 168.8
2148 Female, age 91, left hemisphere 159.2
1855 Male, age 76, left hemisphere 152.7
Dentate gyrus
nTPM: 176.6
2530 Female, age 94, left hemisphere 261.3
2531 Female, age 67, both hemispheres 167.2
2246 Female, age 85, both hemispheres 166.0
2010 Male, age 76, both hemispheres 165.5
2528 Male, age 74, both hemispheres 157.5
1927 Female, age 91, both hemispheres 142.0
Entorhinal gyrus
nTPM: 180.8
2117 Female, age 91, right hemisphere 234.4
2686 Male, age 75, right hemisphere 192.9
2764 Male, age 80, right hemisphere 185.5
1938 Female, age 85, left hemisphere 171.1
2613 Female, age 94, left hemisphere 163.1
1787 Male, age 76, left hemisphere 137.7
Hippocampus, CA1
nTPM: 153.6
2527 Male, age 74, both hemispheres 182.5
1873 Female, age 85, both hemispheres 168.2
2082 Female, age 91, right hemisphere 155.0
2749 Male, age 80, left hemisphere 143.2
2045 Male, age 76, both hemispheres 119.1
Hippocampus, CA2
nTPM: 171.8
1963 Male, age 80, left hemisphere 194.6
2437 Female, age 94, left hemisphere 192.5
2249 Male, age 74, both hemispheres 173.4
1940 Female, age 85, left hemisphere 169.9
2113 Female, age 91, right hemisphere 162.6
1892 Male, age 76, both hemispheres 137.6
Hippocampus, CA3
nTPM: 150.7
1891 Female, age 85, both hemispheres 217.8
1867 Male, age 76, both hemispheres 150.9
2436 Male, age 74, both hemispheres 146.0
2861 Female, age 67, both hemispheres 134.4
2137 Male, age 80, left hemisphere 131.0
2620 Female, age 94, left hemisphere 123.8
Parahippocampal cortex
nTPM: 165.0
2532 Female, age 72, left hemisphere 210.9
2692 Male, age 74, both hemispheres 195.1
2245 Female, age 91, both hemispheres 177.6
1990 Female, age 91, right hemisphere 175.7
1850 Male, age 80, both hemispheres 169.1
1933 Female, age 85, both hemispheres 160.4
2018 Male, age 76, both hemispheres 151.2
2622 Female, age 67, right hemisphere 139.4
2693 Female, age 94, both hemispheres 137.7
2250 Female, age 67, right hemisphere 133.0
Perirhinal gyrus
nTPM: 136.0
2521 Female, age 94, right hemisphere 140.8
1794 Male, age 80, right hemisphere 137.6
1841 Female, age 85, right hemisphere 133.9
2848 Male, age 76, right hemisphere 133.9
1847 Female, age 91, left hemisphere 133.6
Subiculum
nTPM: 208.7
2438 Female, age 94, left hemisphere 240.5
1901 Male, age 80, both hemispheres 239.2
2042 Male, age 76, both hemispheres 238.1
1977 Female, age 85, both hemispheres 202.6
2619 Male, age 74, both hemispheres 174.1
2729 Female, age 91, right hemisphere 157.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 223.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 223.0
Samples: 197

Max nTPM: 794.3
Min nTPM: 18.3
Std nTPM: 138.5
Median nTPM: 191.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 794.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 662.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 652.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 606.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 596.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 584.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 565.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 548.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 533.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 480.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 467.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 269.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 269.3
FF:10153-102I9 76 years, female 347.3
FF:10169-103B7 60 years, female 191.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 153.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 153.8
Samples: 4

Max nTPM: 249.0
Min nTPM: 34.6
Sample A Female 249.0
Sample B Female 101.2
Sample C Male 230.4
Sample D Male 34.6
Entorhinal cortex
nTPM: 37.5
Samples: 4

Max nTPM: 67.9
Min nTPM: 22.4
Sample A Female 22.5
Sample B Female 67.9
Sample C Male 22.4
Sample D Male 37.2
Subiculum
nTPM: 43.7
Samples: 4

Max nTPM: 52.9
Min nTPM: 28.0
Sample A Female 45.2
Sample B Female 52.9
Sample C Male 28.0
Sample D Male 48.5
Ventral hippocampus
nTPM: 76.3
Samples: 4

Max nTPM: 120.1
Min nTPM: 36.5
Sample A Female 103.8
Sample B Female 36.5
Sample C Male 44.8
Sample D Male 120.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 53.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.3
Samples: 4

Max nTPM: 36.7
Min nTPM: 11.3
Sample A Male 36.7
Sample B Male 26.9
Sample C Female 26.2
Sample D Female 11.3
Hippocampal formation
nTPM: 53.5
Samples: 4

Max nTPM: 75.8
Min nTPM: 38.6
Sample A Male 38.6
Sample B Male 46.3
Sample C Female 75.8
Sample D Female 53.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.4
69448632 Antisense, RP_050419_02_F04, Mouse strain C57BL/6J (56 days, male) 5.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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