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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:25.2 nTPM
HPA:25.2 nTPM
GTEx:33.2 nTPM
FANTOM5:30.5 Scaled Tags Per Million
Pig:15.8 nTPM
Mouse:19.6 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034598
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.2
Sample id Sample description nTPM
Hippocampus
nTPM: 23.7
1898 Male, age 80, left hemisphere 25.7
2621 Female, age 67, right hemisphere 24.2
1855 Male, age 76, left hemisphere 23.6
1911 Female, age 85, right hemisphere 23.1
2148 Female, age 91, left hemisphere 23.0
2529 Female, age 94, left hemisphere 22.7
Dentate gyrus
nTPM: 23.8
2530 Female, age 94, left hemisphere 26.8
2010 Male, age 76, both hemispheres 23.6
2528 Male, age 74, both hemispheres 23.5
1927 Female, age 91, both hemispheres 23.3
2531 Female, age 67, both hemispheres 22.9
2246 Female, age 85, both hemispheres 22.6
Entorhinal gyrus
nTPM: 24.6
2764 Male, age 80, right hemisphere 27.0
1787 Male, age 76, left hemisphere 25.4
2117 Female, age 91, right hemisphere 24.9
2613 Female, age 94, left hemisphere 24.3
1938 Female, age 85, left hemisphere 23.9
2686 Male, age 75, right hemisphere 22.3
Hippocampus, CA1
nTPM: 24.4
2749 Male, age 80, left hemisphere 26.9
2527 Male, age 74, both hemispheres 24.7
1873 Female, age 85, both hemispheres 24.3
2045 Male, age 76, both hemispheres 23.6
2082 Female, age 91, right hemisphere 22.4
Hippocampus, CA2
nTPM: 24.6
1892 Male, age 76, both hemispheres 26.1
2437 Female, age 94, left hemisphere 26.0
1963 Male, age 80, left hemisphere 25.8
2249 Male, age 74, both hemispheres 25.7
2113 Female, age 91, right hemisphere 22.0
1940 Female, age 85, left hemisphere 21.9
Hippocampus, CA3
nTPM: 24.0
2620 Female, age 94, left hemisphere 26.2
2137 Male, age 80, left hemisphere 24.6
1867 Male, age 76, both hemispheres 24.2
2436 Male, age 74, both hemispheres 23.3
1891 Female, age 85, both hemispheres 23.0
2861 Female, age 67, both hemispheres 22.5
Parahippocampal cortex
nTPM: 24.0
1850 Male, age 80, both hemispheres 25.7
2245 Female, age 91, both hemispheres 24.8
1933 Female, age 85, both hemispheres 24.5
1990 Female, age 91, right hemisphere 24.5
2250 Female, age 67, right hemisphere 24.4
2532 Female, age 72, left hemisphere 23.9
2693 Female, age 94, both hemispheres 23.2
2692 Male, age 74, both hemispheres 23.1
2018 Male, age 76, both hemispheres 23.0
2622 Female, age 67, right hemisphere 22.9
Perirhinal gyrus
nTPM: 25.2
1794 Male, age 80, right hemisphere 26.3
1847 Female, age 91, left hemisphere 25.3
2848 Male, age 76, right hemisphere 25.1
1841 Female, age 85, right hemisphere 24.8
2521 Female, age 94, right hemisphere 24.4
Subiculum
nTPM: 24.2
2619 Male, age 74, both hemispheres 25.6
1901 Male, age 80, both hemispheres 24.9
1977 Female, age 85, both hemispheres 24.7
2438 Female, age 94, left hemisphere 23.5
2729 Female, age 91, right hemisphere 23.5
2042 Male, age 76, both hemispheres 22.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.2
Samples: 197

Max nTPM: 56.0
Min nTPM: 13.9
Std nTPM: 6.8
Median nTPM: 32.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 56.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 52.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 48.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 48.3
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 47.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 46.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 46.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 45.2
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 44.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 44.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 43.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.5
FF:10169-103B7 60 years, female 32.4
FF:10153-102I9 76 years, female 28.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 19.1
Min nTPM: 14.1
Sample A Female 19.1
Sample B Female 15.1
Sample C Male 14.1
Sample D Male 15.0
Entorhinal cortex
nTPM: 12.4
Samples: 4

Max nTPM: 13.4
Min nTPM: 10.9
Sample A Female 12.2
Sample B Female 13.4
Sample C Male 13.1
Sample D Male 10.9
Subiculum
nTPM: 12.9
Samples: 4

Max nTPM: 16.5
Min nTPM: 10.4
Sample A Female 16.5
Sample B Female 12.3
Sample C Male 10.4
Sample D Male 12.4
Ventral hippocampus
nTPM: 13.7
Samples: 4

Max nTPM: 16.1
Min nTPM: 11.4
Sample A Female 13.1
Sample B Female 11.4
Sample C Male 14.3
Sample D Male 16.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 17.6
Min nTPM: 13.5
Sample A Male 16.8
Sample B Male 17.6
Sample C Female 17.3
Sample D Female 13.5
Hippocampal formation
nTPM: 19.7
Samples: 4

Max nTPM: 21.4
Min nTPM: 17.7
Sample A Male 21.4
Sample B Male 20.7
Sample C Female 17.7
Sample D Female 18.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
68633014 Antisense, RP_050125_02_C05, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

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